| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.794020828732] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| 1,3-beta-glucan synthase complex | 1.5158E-7 | 2 | 3 | 2 | 6292 |
| plasma membrane part | 8.0641E-5 | 2 | 57 | 2 | 6292 |
| plasma membrane | 1.8077E-3 | 2 | 268 | 2 | 6292 |
| actin cap | 3.811E-3 | 2 | 12 | 1 | 6292 |
| prospore membrane | 6.0308E-3 | 2 | 19 | 1 | 6292 |
| intracellular immature spore | 6.0308E-3 | 2 | 19 | 1 | 6292 |
| ascospore-type prospore | 6.0308E-3 | 2 | 19 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| external encapsulating structure organization | 7.5174E-4 | 2 | 173 | 2 | 6292 |
| cell wall organization | 7.5174E-4 | 2 | 173 | 2 | 6292 |
| cellular cell wall organization | 7.5174E-4 | 2 | 173 | 2 | 6292 |
| cellular cell wall organization or biogenesis | 1.0877E-3 | 2 | 208 | 2 | 6292 |
| cell wall organization or biogenesis | 1.0877E-3 | 2 | 208 | 2 | 6292 |
| reproduction of a single-celled organism | 1.1841E-3 | 2 | 217 | 2 | 6292 |
| 1,3-beta-glucan biosynthetic process | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| 1,3-beta-glucan metabolic process | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| beta-glucan biosynthetic process | 2.5415E-3 | 2 | 8 | 1 | 6292 |
| reproduction | 2.7096E-3 | 2 | 328 | 2 | 6292 |
| beta-glucan metabolic process | 2.859E-3 | 2 | 9 | 1 | 6292 |
| glucan biosynthetic process | 7.2981E-3 | 2 | 23 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| 1,3-beta-glucan synthase activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| UDP-glucosyltransferase activity | 4.4455E-3 | 2 | 14 | 1 | 6292 |
| glucosyltransferase activity | 5.0798E-3 | 2 | 16 | 1 | 6292 |
| UDP-glycosyltransferase activity | 8.5646E-3 | 2 | 27 | 1 | 6292 |