| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.854130899393] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| CHS3 |
|
|
|
| GSC2 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| prospore membrane | 8.6401E-6 | 2 | 19 | 2 | 6292 |
| intracellular immature spore | 8.6401E-6 | 2 | 19 | 2 | 6292 |
| ascospore-type prospore | 8.6401E-6 | 2 | 19 | 2 | 6292 |
| chitosome | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| 1,3-beta-glucan synthase complex | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| actin cap | 3.811E-3 | 2 | 12 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| UDP-glycosyltransferase activity | 1.7735E-5 | 2 | 27 | 2 | 6292 |
| transferase activity, transferring hexosyl groups | 1.5966E-4 | 2 | 80 | 2 | 6292 |
| transferase activity, transferring glycosyl groups | 2.7062E-4 | 2 | 104 | 2 | 6292 |
| 1,3-beta-glucan synthase activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| chitin synthase activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| acetylglucosaminyltransferase activity | 1.9064E-3 | 2 | 6 | 1 | 6292 |
| UDP-glucosyltransferase activity | 4.4455E-3 | 2 | 14 | 1 | 6292 |
| glucosyltransferase activity | 5.0798E-3 | 2 | 16 | 1 | 6292 |