From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.871360968608] |
Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
microtubule | 2.3495E-5 | 2 | 31 | 2 | 6292 |
microtubule organizing center | 9.8679E-5 | 2 | 63 | 2 | 6292 |
spindle pole body | 9.8679E-5 | 2 | 63 | 2 | 6292 |
spindle pole | 1.151E-4 | 2 | 68 | 2 | 6292 |
spindle | 1.9786E-4 | 2 | 89 | 2 | 6292 |
microtubule cytoskeleton | 2.8118E-4 | 2 | 106 | 2 | 6292 |
cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
Ndc80 complex | 1.2712E-3 | 2 | 4 | 1 | 6292 |
kinesin complex | 2.224E-3 | 2 | 7 | 1 | 6292 |
cytoplasmic microtubule | 4.4455E-3 | 2 | 14 | 1 | 6292 |
spindle microtubule | 5.3968E-3 | 2 | 17 | 1 | 6292 |
microtubule associated complex | 5.7138E-3 | 2 | 18 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
microtubule cytoskeleton organization | 2.3525E-4 | 2 | 97 | 2 | 6292 |
microtubule-based process | 3.0847E-4 | 2 | 111 | 2 | 6292 |
chromosome segregation | 4.1068E-4 | 2 | 128 | 2 | 6292 |
cytoskeleton organization | 1.3422E-3 | 2 | 231 | 2 | 6292 |
establishment of spindle localization | 3.1764E-3 | 2 | 10 | 1 | 6292 |
establishment of spindle orientation | 3.1764E-3 | 2 | 10 | 1 | 6292 |
establishment of mitotic spindle localization | 3.1764E-3 | 2 | 10 | 1 | 6292 |
spindle localization | 3.1764E-3 | 2 | 10 | 1 | 6292 |
establishment of mitotic spindle orientation | 3.1764E-3 | 2 | 10 | 1 | 6292 |
karyogamy involved in conjugation with cellular fusion | 5.7138E-3 | 2 | 18 | 1 | 6292 |
karyogamy | 5.7138E-3 | 2 | 18 | 1 | 6292 |
microtubule nucleation | 7.2981E-3 | 2 | 23 | 1 | 6292 |
mitotic spindle organization in nucleus | 8.248E-3 | 2 | 26 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
microtubule motor activity | 3.1764E-3 | 2 | 10 | 1 | 6292 |
motor activity | 5.7138E-3 | 2 | 18 | 1 | 6292 |