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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.89781468239]
Complex Size: 2 proteins

Complex Member Proteins

Protein

 GO Cellular Component GO Biological Process GO Molecular Function
FUS3
  • nucleus
  • cytoplasm
  • mitochondrion
  • mating projection tip
    		•
  • cell cycle arrest
  • invasive growth in response to glucose limitation
  • signal transduction during filamentous growth
  • protein amino acid phosphorylation
  • pheromone-dependent signal transduction involved in conjugation with cellular fusion
    		•
  • MAP kinase activity
    		•
    KSS1
  • nucleus
    		•
  • invasive growth in response to glucose limitation
  • signal transduction during filamentous growth
    		•
  • MAP kinase activity
    		•

    Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    signal transduction during filamentous growth 1.4147E-6 2 8 2 6292
    invasive growth in response to glucose limitation 5.4619E-5 2 47 2 6292
    filamentous growth of a population of unicellular organisms 2.0236E-4 2 90 2 6292
    growth of unicellular organism as a thread of attached cells 2.0236E-4 2 90 2 6292
    filamentous growth 2.8118E-4 2 106 2 6292
    growth 5.275E-4 2 145 2 6292
    signal transduction 1.1516E-3 2 214 2 6292
    signal transmission 1.1841E-3 2 217 2 6292
    signaling process 1.1841E-3 2 217 2 6292
    signaling 1.598E-3 2 252 2 6292
    cell cycle arrest 3.4937E-3 2 11 1 6292
    regulation of conjugation with cellular fusion by signal transduction 8.5646E-3 2 27 1 6292
    pheromone-dependent signal transduction involved in conjugation with cellular fusion 8.5646E-3 2 27 1 6292
    G-protein coupled receptor protein signaling pathway 9.8303E-3 2 31 1 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    MAP kinase activity 5.0527E-7 2 5 2 6292
    receptor signaling protein serine/threonine kinase activity 3.1832E-5 2 36 2 6292
    receptor signaling protein activity 3.3651E-5 2 37 2 6292
    molecular transducer activity 1.5966E-4 2 80 2 6292
    signal transducer activity 1.5966E-4 2 80 2 6292
    protein serine/threonine kinase activity 2.0691E-4 2 91 2 6292
    protein kinase activity 6.1087E-4 2 156 2 6292
    phosphotransferase activity, alcohol group as acceptor 9.8542E-4 2 198 2 6292
    kinase activity 1.2395E-3 2 222 2 6292
    transferase activity, transferring phosphorus-containing groups 4.4459E-3 2 420 2 6292
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle