| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.942154810634] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| myosin complex | 1.5158E-7 | 2 | 3 | 2 | 6292 |
| actin cytoskeleton | 1.8038E-4 | 2 | 85 | 2 | 6292 |
| myosin II complex | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| myosin V complex | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| unconventional myosin complex | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| filamentous actin | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| cellular bud | 6.9196E-4 | 2 | 166 | 2 | 6292 |
| cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
| cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
| actin filament | 2.859E-3 | 2 | 9 | 1 | 6292 |
| cellular bud neck contractile ring | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| actomyosin contractile ring | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| contractile ring | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| cell division site | 8.5646E-3 | 2 | 27 | 1 | 6292 |
| cell division site part | 8.5646E-3 | 2 | 27 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| endoplasmic reticulum inheritance | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| actomyosin structure organization | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| cytokinesis, actomyosin contractile ring assembly | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| assembly of actomyosin apparatus involved in cell cycle cytokinesis | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| contractile ring contraction involved in cell cycle cytokinesis | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| endoplasmic reticulum organization | 1.9064E-3 | 2 | 6 | 1 | 6292 |
| cytokinesis, completion of separation | 2.224E-3 | 2 | 7 | 1 | 6292 |
| cytokinetic cell separation | 2.859E-3 | 2 | 9 | 1 | 6292 |
| intracellular mRNA localization | 3.1764E-3 | 2 | 10 | 1 | 6292 |
| gene conversion at mating-type locus | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| mating type switching | 5.0798E-3 | 2 | 16 | 1 | 6292 |
| mating type determination | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| sex determination | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| cell fate commitment | 7.2981E-3 | 2 | 23 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| microfilament motor activity | 5.0527E-7 | 2 | 5 | 2 | 6292 |
| motor activity | 7.7306E-6 | 2 | 18 | 2 | 6292 |
| nucleoside-triphosphatase activity | 2.7262E-3 | 2 | 329 | 2 | 6292 |
| hydrolase activity, acting on acid anhydrides | 3.1391E-3 | 2 | 353 | 2 | 6292 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 3.1391E-3 | 2 | 353 | 2 | 6292 |
| pyrophosphatase activity | 3.1391E-3 | 2 | 353 | 2 | 6292 |
| actin filament binding | 3.811E-3 | 2 | 12 | 1 | 6292 |
| actin binding | 6.6645E-3 | 2 | 21 | 1 | 6292 |