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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 1.00116525342]
Complex Size: 2 proteins

Complex Member Proteins

Protein

 GO Cellular Component GO Biological Process GO Molecular Function
COX20
  • mitochondrion
  • mitochondrial inner membrane
    		•
  • protein processing
  • aerobic respiration
  • respiratory chain complex IV assembly
    		•
  • unfolded protein binding
    		•
    PET100
  • integral to mitochondrial inner membrane
  • mitochondrion
  • mitochondrial inner membrane
    		•
  • aerobic respiration
  • respiratory chain complex IV assembly
    		•
  • unfolded protein binding
    		•

    Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    integral to mitochondrial inner membrane 3.1786E-4 2 1 1 6292
    intrinsic to mitochondrial inner membrane 3.1786E-4 2 1 1 6292
    mitochondrial inner membrane 7.6048E-4 2 174 2 6292
    organelle inner membrane 8.5997E-4 2 185 2 6292
    mitochondrial membrane 1.7808E-3 2 266 2 6292
    mitochondrial envelope 2.4514E-3 2 312 2 6292
    integral to mitochondrial membrane 4.4455E-3 2 14 1 6292
    mitochondrial part 5.6881E-3 2 475 2 6292
    envelope 6.43E-3 2 505 2 6292
    organelle envelope 6.43E-3 2 505 2 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    respiratory chain complex IV assembly 1.4147E-6 2 8 2 6292
    cellular protein complex assembly 7.2304E-5 2 54 2 6292
    aerobic respiration 1.7194E-4 2 83 2 6292
    cellular respiration 2.3525E-4 2 97 2 6292
    energy derivation by oxidation of organic compounds 5.5711E-4 2 149 2 6292
    protein complex assembly 6.0304E-4 2 155 2 6292
    protein complex biogenesis 6.0304E-4 2 155 2 6292
    cellular macromolecular complex assembly 8.3223E-4 2 182 2 6292
    generation of precursor metabolites and energy 9.5571E-4 2 195 2 6292
    cellular macromolecular complex subunit organization 1.6882E-3 2 259 2 6292
    macromolecular complex assembly 1.9877E-3 2 281 2 6292
    macromolecular complex subunit organization 3.2108E-3 2 357 2 6292
    cellular component assembly 3.7349E-3 2 385 2 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    unfolded protein binding 9.2464E-5 2 61 2 6292
    protein binding 9.4468E-3 2 612 2 6292
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle