| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 1.23120096979] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| RCE1 |
|
|
|
| STE24 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| integral to endoplasmic reticulum membrane | 2.3495E-5 | 2 | 31 | 2 | 6292 |
| intrinsic to endoplasmic reticulum membrane | 2.3495E-5 | 2 | 31 | 2 | 6292 |
| integral to organelle membrane | 1.051E-4 | 2 | 65 | 2 | 6292 |
| intrinsic to organelle membrane | 1.151E-4 | 2 | 68 | 2 | 6292 |
| endoplasmic reticulum membrane | 4.4352E-4 | 2 | 133 | 2 | 6292 |
| endoplasmic reticulum part | 5.6464E-4 | 2 | 150 | 2 | 6292 |
| subsynaptic reticulum | 5.6464E-4 | 2 | 150 | 2 | 6292 |
| nuclear membrane-endoplasmic reticulum network | 1.3539E-3 | 2 | 232 | 2 | 6292 |
| integral to membrane | 1.6363E-3 | 2 | 255 | 2 | 6292 |
| intrinsic to membrane | 1.7276E-3 | 2 | 262 | 2 | 6292 |
| endoplasmic reticulum | 3.3381E-3 | 2 | 364 | 2 | 6292 |
| endomembrane system | 3.9918E-3 | 2 | 398 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| peptide pheromone maturation | 1.819E-6 | 2 | 9 | 2 | 6292 |
| protein maturation | 3.9411E-5 | 2 | 40 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| prenyl-dependent CAAX protease activity | 5.0527E-8 | 2 | 2 | 2 | 6292 |
| obsolete_molecular_function | 1.1854E-4 | 2 | 69 | 2 | 6292 |
| metalloendopeptidase activity | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| metallopeptidase activity | 5.0798E-3 | 2 | 16 | 1 | 6292 |