From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.091] [SVM Score: 0.327544080839] |
Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
mitochondrial ribonuclease P complex | 3.1786E-4 | 2 | 1 | 1 | 6292 |
mitochondrial respiratory chain complex III | 3.1764E-3 | 2 | 10 | 1 | 6292 |
respiratory chain complex III | 3.1764E-3 | 2 | 10 | 1 | 6292 |
ribonuclease P complex | 3.1764E-3 | 2 | 10 | 1 | 6292 |
cytoplasmic mRNA processing body | 4.7627E-3 | 2 | 15 | 1 | 6292 |
mitochondrial part | 5.6881E-3 | 2 | 475 | 2 | 6292 |
mitochondrial respiratory chain | 8.248E-3 | 2 | 26 | 1 | 6292 |
respiratory chain | 8.248E-3 | 2 | 26 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
tRNA 5'-leader removal | 3.1786E-4 | 2 | 1 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
ubiquinol-cytochrome-c reductase activity | 2.859E-3 | 2 | 9 | 1 | 6292 |
oxidoreductase activity, acting on diphenols and related substances as donors | 2.859E-3 | 2 | 9 | 1 | 6292 |
oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor | 2.859E-3 | 2 | 9 | 1 | 6292 |
ribonuclease P activity | 3.1764E-3 | 2 | 10 | 1 | 6292 |
tRNA-specific ribonuclease activity | 4.7627E-3 | 2 | 15 | 1 | 6292 |
endoribonuclease activity, producing 5'-phosphomonoesters | 5.7138E-3 | 2 | 18 | 1 | 6292 |
endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 7.2981E-3 | 2 | 23 | 1 | 6292 |
endoribonuclease activity | 8.5646E-3 | 2 | 27 | 1 | 6292 |