YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.414778822202]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mitochondrial membrane part 2.5011E-4 2 100 2 6292
proton-transporting ATP synthase, catalytic core 6.3568E-4 2 2 1 6292
mitochondrial proton-transporting ATP synthase, catalytic core 6.3568E-4 2 2 1 6292
proton-transporting ATP synthase complex, catalytic core F(1) 1.5888E-3 2 5 1 6292
mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) 1.5888E-3 2 5 1 6292
mitochondrial membrane 1.7808E-3 2 266 2 6292
mitochondrial envelope 2.4514E-3 2 312 2 6292
proton-transporting two-sector ATPase complex, catalytic domain 4.1283E-3 2 13 1 6292
integral to mitochondrial outer membrane 4.1283E-3 2 13 1 6292
intrinsic to mitochondrial outer membrane 4.1283E-3 2 13 1 6292
integral to mitochondrial membrane 4.4455E-3 2 14 1 6292
mitochondrial part 5.6881E-3 2 475 2 6292
mitochondrial proton-transporting ATP synthase complex 6.3477E-3 2 20 1 6292
proton-transporting ATP synthase complex 6.3477E-3 2 20 1 6292
envelope 6.43E-3 2 505 2 6292
organelle envelope 6.43E-3 2 505 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

age-dependent general metabolic decline involved in replicative cell aging 3.1786E-4 2 1 1 6292
ion transport 3.6076E-4 2 120 2 6292
generation of precursor metabolites and energy 9.5571E-4 2 195 2 6292
age-dependent general metabolic decline 2.5415E-3 2 8 1 6292
ATP synthesis coupled proton transport 6.3477E-3 2 20 1 6292
energy coupled proton transport, down electrochemical gradient 6.3477E-3 2 20 1 6292
ATP metabolic process 6.3477E-3 2 20 1 6292
ATP biosynthetic process 6.3477E-3 2 20 1 6292
purine ribonucleoside triphosphate biosynthetic process 6.9813E-3 2 22 1 6292
purine nucleoside triphosphate biosynthetic process 6.9813E-3 2 22 1 6292
proton transport 7.6148E-3 2 24 1 6292
ribonucleoside triphosphate biosynthetic process 7.6148E-3 2 24 1 6292
hydrogen transport 7.6148E-3 2 24 1 6292
purine ribonucleoside triphosphate metabolic process 8.5646E-3 2 27 1 6292
purine nucleoside triphosphate metabolic process 8.5646E-3 2 27 1 6292
nucleoside triphosphate biosynthetic process 8.5646E-3 2 27 1 6292
ribonucleoside triphosphate metabolic process 9.1975E-3 2 29 1 6292
monovalent inorganic cation transport 9.8303E-3 2 31 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ion transmembrane transporter activity 5.3483E-4 2 146 2 6292
anion channel activity 9.5344E-4 2 3 1 6292
voltage-gated anion channel activity 9.5344E-4 2 3 1 6292
substrate-specific transmembrane transporter activity 1.7943E-3 2 267 2 6292
transmembrane transporter activity 2.3578E-3 2 306 2 6292
voltage-gated channel activity 2.5415E-3 2 8 1 6292
voltage-gated ion channel activity 2.5415E-3 2 8 1 6292
substrate-specific transporter activity 2.8436E-3 2 336 2 6292
gated channel activity 2.859E-3 2 9 1 6292
ion channel activity 3.1764E-3 2 10 1 6292
transporter activity 4.1132E-3 2 404 2 6292
channel activity 4.1283E-3 2 13 1 6292
passive transmembrane transporter activity 4.1283E-3 2 13 1 6292
substrate-specific channel activity 4.1283E-3 2 13 1 6292
hydrogen ion transporting ATP synthase activity, rotational mechanism 4.7627E-3 2 15 1 6292
anion transmembrane transporter activity 6.6645E-3 2 21 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle