From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.423338558274] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
GTS1 |
|
|
|
PRP2 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
ultradian rhythm | 3.1786E-4 | 2 | 1 | 1 | 6292 |
rhythmic process | 3.1786E-4 | 2 | 1 | 1 | 6292 |
generation of catalytic spliceosome for first transesterification step | 9.5344E-4 | 2 | 3 | 1 | 6292 |
drug transmembrane transport | 2.5415E-3 | 2 | 8 | 1 | 6292 |
spliceosomal conformational changes to generate catalytic conformation | 2.859E-3 | 2 | 9 | 1 | 6292 |
drug transport | 4.1283E-3 | 2 | 13 | 1 | 6292 |
chronological cell aging | 4.4455E-3 | 2 | 14 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
transcription coactivator activity | 6.6645E-3 | 2 | 21 | 1 | 6292 |
ATP-dependent RNA helicase activity | 8.8811E-3 | 2 | 28 | 1 | 6292 |
RNA-dependent ATPase activity | 9.1975E-3 | 2 | 29 | 1 | 6292 |