| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.038] [SVM Score: 0.736176159531] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| PMA2 |
|
|
|
| PMP2 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| cation transport | 2.256E-4 | 2 | 95 | 2 | 6292 |
| ion transport | 3.6076E-4 | 2 | 120 | 2 | 6292 |
| proton transport | 7.6148E-3 | 2 | 24 | 1 | 6292 |
| hydrogen transport | 7.6148E-3 | 2 | 24 | 1 | 6292 |
| regulation of pH | 9.1975E-3 | 2 | 29 | 1 | 6292 |
| monovalent inorganic cation transport | 9.8303E-3 | 2 | 31 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| hydrogen-exporting ATPase activity, phosphorylative mechanism | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 4.4455E-3 | 2 | 14 | 1 | 6292 |
| ATPase activity, coupled to transmembrane movement of ions | 9.1975E-3 | 2 | 29 | 1 | 6292 |