| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.038] [SVM Score: 0.744385099007] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| AMP-activated protein kinase complex | 1.9064E-3 | 2 | 6 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| positive regulation of gluconeogenesis | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| positive regulation of glucose metabolic process | 2.5415E-3 | 2 | 8 | 1 | 6292 |
| positive regulation of cellular carbohydrate metabolic process | 2.5415E-3 | 2 | 8 | 1 | 6292 |
| positive regulation of carbohydrate metabolic process | 2.5415E-3 | 2 | 8 | 1 | 6292 |
| regulation of protein complex assembly | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| regulation of gluconeogenesis | 5.0798E-3 | 2 | 16 | 1 | 6292 |
| regulation of cellular component biogenesis | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| regulation of cellular ketone metabolic process | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| regulation of carbohydrate biosynthetic process | 6.9813E-3 | 2 | 22 | 1 | 6292 |
| regulation of glucose metabolic process | 9.1975E-3 | 2 | 29 | 1 | 6292 |
| regulation of cellular carbohydrate metabolic process | 9.1975E-3 | 2 | 29 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| AMP-activated protein kinase activity | 1.9064E-3 | 2 | 6 | 1 | 6292 |