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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.874521596081]
Complex Size: 2 proteins

Complex Member Proteins

Protein

 GO Cellular Component GO Biological Process GO Molecular Function
BIK1
  • spindle microtubule
  • cell cortex
  • spindle pole body
  • spindle
  • condensed nuclear chromosome kinetochore
  • kinetochore
    		•
  • mitotic spindle elongation
  • mitotic anaphase B
  • mitotic spindle organization in nucleus
  • karyogamy involved in conjugation with cellular fusion
    		•
  • microtubule binding
    		•
    KAR3
  • spindle pole body
  • microtubule
    		•
  • mitotic sister chromatid cohesion
  • mitosis
  • karyogamy involved in conjugation with cellular fusion
  • meiosis
    		•
  • microtubule motor activity
  • motor activity
    		•

    Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    microtubule 2.3495E-5 2 31 2 6292
    microtubule organizing center 9.8679E-5 2 63 2 6292
    spindle pole body 9.8679E-5 2 63 2 6292
    spindle pole 1.151E-4 2 68 2 6292
    spindle 1.9786E-4 2 89 2 6292
    microtubule cytoskeleton 2.8118E-4 2 106 2 6292
    cytoskeletal part 1.0156E-3 2 201 2 6292
    cytoskeleton 1.1732E-3 2 216 2 6292
    spindle microtubule 5.3968E-3 2 17 1 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    karyogamy involved in conjugation with cellular fusion 7.7306E-6 2 18 2 6292
    karyogamy 7.7306E-6 2 18 2 6292
    organelle fusion 7.2304E-5 2 54 2 6292
    nucleus organization 7.7811E-5 2 56 2 6292
    mitosis 2.7062E-4 2 104 2 6292
    nuclear division 2.8118E-4 2 106 2 6292
    organelle fission 3.1973E-4 2 113 2 6292
    conjugation with cellular fusion 3.9158E-4 2 125 2 6292
    conjugation 3.979E-4 2 126 2 6292
    M phase of mitotic cell cycle 4.1068E-4 2 128 2 6292
    multi-organism process 5.13E-4 2 143 2 6292
    reproductive cellular process 1.1194E-3 2 211 2 6292
    reproductive process 1.1301E-3 2 212 2 6292
    sexual reproduction 1.3656E-3 2 233 2 6292
    mitotic cell cycle 1.6363E-3 2 255 2 6292
    mitotic anaphase B 1.9064E-3 2 6 1 6292
    M phase 2.1762E-3 2 294 2 6292
    anaphase 2.224E-3 2 7 1 6292
    mitotic anaphase 2.224E-3 2 7 1 6292
    reproduction 2.7096E-3 2 328 2 6292
    cell cycle phase 3.5621E-3 2 376 2 6292
    cell cycle process 6.0534E-3 2 490 2 6292
    mitotic spindle elongation 6.6645E-3 2 21 1 6292
    spindle elongation 6.6645E-3 2 21 1 6292
    cell cycle 6.95E-3 2 525 2 6292
    mitotic sister chromatid cohesion 7.2981E-3 2 23 1 6292
    mitotic spindle organization in nucleus 8.248E-3 2 26 1 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    microtubule binding 3.1764E-3 2 10 1 6292
    microtubule motor activity 3.1764E-3 2 10 1 6292
    motor activity 5.7138E-3 2 18 1 6292
    tubulin binding 6.3477E-3 2 20 1 6292
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle