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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Van1. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

alpha-1,6-mannosyltransferase complex 7.5694E-6 5 6 2 6292
mannosyltransferase complex 7.5694E-6 5 6 2 6292
Golgi cis cisterna 2.2679E-5 5 10 2 6292
cis-Golgi network 3.9273E-5 5 13 2 6292
Golgi stack 6.0363E-5 5 16 2 6292
Golgi cisterna 6.0363E-5 5 16 2 6292
organelle subcompartment 6.0363E-5 5 16 2 6292
Golgi apparatus part 3.4173E-3 5 119 2 6292
Golgi apparatus 6.9573E-3 5 171 2 6292
oligosaccharyltransferase complex 7.9239E-3 5 10 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein amino acid N-linked glycosylation 1.6145E-8 5 49 4 6292
protein amino acid glycosylation 9.2307E-8 5 75 4 6292
glycosylation 9.2307E-8 5 75 4 6292
macromolecule glycosylation 9.2307E-8 5 75 4 6292
glycoprotein biosynthetic process 1.2626E-7 5 81 4 6292
glycoprotein metabolic process 1.3941E-7 5 83 4 6292
cellular carbohydrate metabolic process 1.4222E-5 5 262 4 6292
carbohydrate metabolic process 1.88E-5 5 281 4 6292
protein modification process 1.8329E-4 5 499 4 6292
macromolecule modification 3.0739E-4 5 569 4 6292
cellular biosynthetic process 9.5349E-4 5 1567 5 6292
biosynthetic process 1.065E-3 5 1602 5 6292
barrier septum formation 2.3825E-3 5 3 1 6292
cellular protein metabolic process 3.6498E-3 5 1074 4 6292
protein metabolic process 4.528E-3 5 1136 4 6292
cellular macromolecule biosynthetic process 5.3579E-3 5 1187 4 6292
macromolecule biosynthetic process 5.3925E-3 5 1189 4 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

transferase activity, transferring hexosyl groups 1.2004E-7 5 80 4 6292
transferase activity, transferring glycosyl groups 3.479E-7 5 104 4 6292
mannosyltransferase activity 2.9457E-6 5 43 3 6292
transferase activity 3.2254E-5 5 797 5 6292
1-acylglycerol-3-phosphate O-acyltransferase activity 7.9466E-4 5 1 1 6292
acylglycerol O-acyltransferase activity 1.5888E-3 5 2 1 6292
catalytic activity 4.6443E-3 5 2150 5 6292
oligosaccharyl transferase activity 7.9239E-3 5 10 1 6292
dolichyl-diphosphooligosaccharide-protein glycotransferase activity 7.9239E-3 5 10 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle