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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Cdc53. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 6 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

fungal-type vacuole lumen 6.6592E-3 6 7 1 6292
vacuolar lumen 8.5551E-3 6 9 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

monohydric alcohol metabolic process 4.1526E-5 6 11 2 6292
ethanol metabolic process 4.1526E-5 6 11 2 6292
cellular protein catabolic process 3.7142E-4 6 171 3 6292
protein catabolic process 4.9905E-4 6 189 3 6292
catabolic process 5.0343E-4 6 496 4 6292
cellular macromolecule catabolic process 1.344E-3 6 265 3 6292
proteasomal protein catabolic process 1.7281E-3 6 69 2 6292
proteasomal ubiquitin-dependent protein catabolic process 1.7281E-3 6 69 2 6292
macromolecule catabolic process 1.8178E-3 6 294 3 6292
cellular catabolic process 4.9029E-3 6 415 3 6292
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process 6.6592E-3 6 7 1 6292
glucose catabolic process to ethanol 6.6592E-3 6 7 1 6292
glycolytic fermentation 7.6075E-3 6 8 1 6292
modification-dependent protein catabolic process 8.581E-3 6 156 2 6292
ubiquitin-dependent protein catabolic process 8.581E-3 6 156 2 6292
proteolysis involved in cellular protein catabolic process 8.9038E-3 6 159 2 6292
modification-dependent macromolecule catabolic process 9.4541E-3 6 164 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

pyruvate decarboxylase activity 4.5436E-6 6 4 2 6292
carboxy-lyase activity 1.4291E-4 6 20 2 6292
carbon-carbon lyase activity 3.2579E-4 6 30 2 6292
hydroxymethylpyrimidine kinase activity 1.9064E-3 6 2 1 6292
lyase activity 2.7971E-3 6 88 2 6292
phosphomethylpyrimidine kinase activity 2.8585E-3 6 3 1 6292
serine-type endopeptidase activity 3.8098E-3 6 4 1 6292
serine-type peptidase activity 5.7102E-3 6 6 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle