| From Publication: | Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3. |
| Notes: | This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Sir3. The topolgies of protein complexes in this experiment are unknown. |
| Complex Size: | 3 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| nuclear heterochromatin | 3.3344E-3 | 3 | 7 | 1 | 6292 |
| heterochromatin | 3.3344E-3 | 3 | 7 | 1 | 6292 |
| nuclear telomeric heterochromatin | 3.3344E-3 | 3 | 7 | 1 | 6292 |
| telomeric heterochromatin | 3.3344E-3 | 3 | 7 | 1 | 6292 |
| proton-transporting V-type ATPase, V1 domain | 3.8101E-3 | 3 | 8 | 1 | 6292 |
| vacuolar proton-transporting V-type ATPase, V1 domain | 3.8101E-3 | 3 | 8 | 1 | 6292 |
| chromatin silencing complex | 4.2857E-3 | 3 | 9 | 1 | 6292 |
| telomere cap complex | 5.2364E-3 | 3 | 11 | 1 | 6292 |
| nuclear telomere cap complex | 5.2364E-3 | 3 | 11 | 1 | 6292 |
| protein complex | 5.8881E-3 | 3 | 1137 | 3 | 6292 |
| proton-transporting two-sector ATPase complex, catalytic domain | 6.1865E-3 | 3 | 13 | 1 | 6292 |
| proton-transporting V-type ATPase complex | 7.136E-3 | 3 | 15 | 1 | 6292 |
| vacuolar proton-transporting V-type ATPase complex | 7.136E-3 | 3 | 15 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| intron homing | 2.8585E-3 | 3 | 6 | 1 | 6292 |
| loss of chromatin silencing involved in replicative cell aging | 4.2857E-3 | 3 | 9 | 1 | 6292 |
| progressive alteration of chromatin involved in replicative cell aging | 4.7611E-3 | 3 | 10 | 1 | 6292 |
| loss of chromatin silencing | 4.7611E-3 | 3 | 10 | 1 | 6292 |
| progressive alteration of chromatin involved in cell aging | 5.2364E-3 | 3 | 11 | 1 | 6292 |
| positive regulation of gene expression, epigenetic | 5.2364E-3 | 3 | 11 | 1 | 6292 |
| regulation of gene silencing | 5.2364E-3 | 3 | 11 | 1 | 6292 |
| negative regulation of gene silencing | 5.2364E-3 | 3 | 11 | 1 | 6292 |
| regulation of chromatin silencing | 5.2364E-3 | 3 | 11 | 1 | 6292 |
| negative regulation of chromatin silencing | 5.2364E-3 | 3 | 11 | 1 | 6292 |
| protein deubiquitination | 9.9809E-3 | 3 | 21 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| structural constituent of chromatin | 9.5344E-4 | 3 | 2 | 1 | 6292 |
| proton-transporting ATPase activity, rotational mechanism | 6.1865E-3 | 3 | 13 | 1 | 6292 |
| histone binding | 6.6614E-3 | 3 | 14 | 1 | 6292 |
| cation-transporting ATPase activity | 7.6106E-3 | 3 | 16 | 1 | 6292 |
| ubiquitin-specific protease activity | 9.5071E-3 | 3 | 20 | 1 | 6292 |