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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Rad53. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

deoxyribonucleoside triphosphate biosynthetic process 6.3568E-4 2 2 1 6292
deoxyribonucleoside triphosphate metabolic process 1.2712E-3 2 4 1 6292
deoxyribonucleotide biosynthetic process 1.2712E-3 2 4 1 6292
response to DNA damage stimulus 1.4011E-3 2 236 2 6292
deoxyribonucleotide metabolic process 1.9064E-3 2 6 1 6292
cellular response to stress 2.1173E-3 2 290 2 6292
cellular response to stimulus 3.6193E-3 2 379 2 6292
DNA damage response, signal transduction 4.4455E-3 2 14 1 6292
DNA damage checkpoint 4.4455E-3 2 14 1 6292
response to stress 6.2277E-3 2 497 2 6292
DNA integrity checkpoint 6.3477E-3 2 20 1 6292
nucleoside triphosphate biosynthetic process 8.5646E-3 2 27 1 6292
DNA metabolic process 8.631E-3 2 585 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein kinase activity 6.1087E-4 2 156 2 6292
phosphotransferase activity, alcohol group as acceptor 9.8542E-4 2 198 2 6292
kinase activity 1.2395E-3 2 222 2 6292
protein serine/threonine/tyrosine kinase activity 2.224E-3 2 7 1 6292
DNA replication origin binding 4.1283E-3 2 13 1 6292
transferase activity, transferring phosphorus-containing groups 4.4459E-3 2 420 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle