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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Lcd1. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

replication fork protection complex 2.224E-3 7 2 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

monohydric alcohol metabolic process 5.8081E-5 7 11 2 6292
ethanol metabolic process 5.8081E-5 7 11 2 6292
NADH oxidation 6.966E-5 7 12 2 6292
NADH metabolic process 1.1065E-4 7 15 2 6292
fermentation 1.9969E-4 7 20 2 6292
NAD metabolic process 3.1446E-4 7 25 2 6292
cofactor metabolic process 4.6822E-4 7 154 3 6292
nicotinamide nucleotide metabolic process 9.3752E-4 7 43 2 6292
pyridine nucleotide metabolic process 1.0729E-3 7 46 2 6292
histone H3-K79 methylation 1.1125E-3 7 1 1 6292
oxidoreduction coenzyme metabolic process 1.7614E-3 7 59 2 6292
histone lysine methylation 2.224E-3 7 2 1 6292
monohydric alcohol biosynthetic process 2.224E-3 7 2 1 6292
ethanol biosynthetic process involved in glucose fermentation to ethanol 2.224E-3 7 2 1 6292
ethanol biosynthetic process 2.224E-3 7 2 1 6292
cellular nitrogen compound metabolic process 2.6186E-3 7 1770 6 6292
nitrogen compound metabolic process 2.8003E-3 7 1791 6 6292
small molecule metabolic process 5.47E-3 7 760 4 6292
coenzyme metabolic process 7.1153E-3 7 120 2 6292
glucose catabolic process to ethanol 7.7654E-3 7 7 1 6292
nucleotide metabolic process 8.0653E-3 7 128 2 6292
nucleoside phosphate metabolic process 8.0653E-3 7 128 2 6292
glycolytic fermentation 8.8705E-3 7 8 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

alcohol dehydrogenase (NAD) activity 2.2223E-5 7 7 2 6292
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 5.0731E-5 7 73 3 6292
oxidoreductase activity, acting on CH-OH group of donors 6.9325E-5 7 81 3 6292
ketol-acid reductoisomerase activity 1.1125E-3 7 1 1 6292
ferrochelatase activity 2.224E-3 7 2 1 6292
oxidoreductase activity 2.6978E-3 7 281 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle