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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Gdi1. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 9 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mitochondrial outer membrane 7.2097E-8 9 92 5 6292
outer membrane 1.9694E-6 9 178 5 6292
organelle outer membrane 1.9694E-6 9 178 5 6292
endosome 5.5601E-6 9 94 4 6292
mitochondrial membrane 1.4257E-5 9 266 5 6292
mitochondrial envelope 3.1035E-5 9 312 5 6292
organelle membrane 1.0867E-4 9 692 6 6292
mitochondrial part 2.3441E-4 9 475 5 6292
envelope 3.1346E-4 9 505 5 6292
organelle envelope 3.1346E-4 9 505 5 6292
late endosome 4.1399E-4 9 22 2 6292
Golgi apparatus 1.4685E-3 9 171 3 6292
mitochondrion 1.6552E-3 9 1125 6 6292
membrane 2.3322E-3 9 1198 6 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

vesicle-mediated transport 5.7647E-10 9 340 8 6292
establishment of localization in cell 2.081E-6 9 599 7 6292
transport 3.0044E-6 9 997 8 6292
establishment of localization 3.2751E-6 9 1008 8 6292
cellular localization 3.3807E-6 9 643 7 6292
localization 4.8623E-6 9 1060 8 6292
exocytosis 2.9796E-5 9 46 3 6292
secretion 4.8407E-5 9 54 3 6292
secretion by cell 4.8407E-5 9 54 3 6292
cellular membrane organization 1.059E-4 9 198 4 6292
membrane organization 1.059E-4 9 198 4 6292
endocytosis 2.0898E-4 9 88 3 6292
membrane invagination 2.5417E-4 9 94 3 6292
vacuolar transport 4.6114E-4 9 115 3 6292
intracellular transport 4.8117E-4 9 553 5 6292
Golgi vesicle transport 1.3952E-3 9 168 3 6292
membrane addition at site of cytokinesis 2.859E-3 9 2 1 6292
cellular membrane fusion 3.8322E-3 9 67 2 6292
membrane fusion 3.8322E-3 9 67 2 6292
post-Golgi vesicle-mediated transport 3.9454E-3 9 68 2 6292
protein targeting to vacuole 4.0601E-3 9 69 2 6292
ascospore-type prospore formation 5.7106E-3 9 4 1 6292
Golgi organization 5.7106E-3 9 4 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

GTPase activity 4.3369E-16 9 61 8 6292
nucleoside-triphosphatase activity 4.426E-10 9 329 8 6292
hydrolase activity, acting on acid anhydrides 7.7918E-10 9 353 8 6292
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 7.7918E-10 9 353 8 6292
pyrophosphatase activity 7.7918E-10 9 353 8 6292
hydrolase activity 1.4767E-6 9 911 8 6292
catalytic activity 1.156E-3 9 2150 8 6292
Rab GDP-dissociation inhibitor activity 1.4304E-3 9 1 1 6292
GDP-dissociation inhibitor activity 2.859E-3 9 2 1 6292

YRC Informatics Platform - Version 3.0
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