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View Protein Complex Details

Complex Overview

From Publication: Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.
Notes: From the published set of protein complexes (core proteins only)
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

clathrin-coated vesicle 4.3185E-7 4 31 3 6292
coated vesicle 8.7723E-6 4 83 3 6292
trans-Golgi network transport vesicle 1.6642E-5 4 11 2 6292
cytoplasmic vesicle 1.8896E-5 4 107 3 6292
membrane-bounded vesicle 1.8896E-5 4 107 3 6292
cytoplasmic membrane-bounded vesicle 1.8896E-5 4 107 3 6292
vesicle 2.0538E-5 4 110 3 6292
Golgi-associated vesicle 2.3456E-4 4 40 2 6292
transport vesicle 2.974E-4 4 45 2 6292
Golgi apparatus part 2.0761E-3 4 119 2 6292
Golgi apparatus 4.2502E-3 4 171 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cell wall chitin metabolic process 3.2188E-12 4 10 4 6292
cell wall polysaccharide metabolic process 7.5871E-12 4 12 4 6292
aminoglycan metabolic process 1.0959E-11 4 13 4 6292
chitin metabolic process 1.0959E-11 4 13 4 6292
cell wall macromolecule metabolic process 1.6287E-10 4 24 4 6292
Golgi to plasma membrane transport 4.8228E-10 4 31 4 6292
polysaccharide metabolic process 7.4742E-9 4 60 4 6292
cell wall chitin biosynthetic process 8.0913E-9 4 9 3 6292
cell wall polysaccharide biosynthetic process 8.0913E-9 4 9 3 6292
post-Golgi vesicle-mediated transport 1.2482E-8 4 68 4 6292
aminoglycan biosynthetic process 1.589E-8 4 11 3 6292
chitin biosynthetic process 1.589E-8 4 11 3 6292
cell wall biogenesis 2.4242E-8 4 80 4 6292
cell wall macromolecule biosynthetic process 1.4811E-7 4 22 3 6292
cellular component macromolecule biosynthetic process 1.4811E-7 4 22 3 6292
cellular cell wall macromolecule metabolic process 1.7031E-7 4 23 3 6292
cellular polysaccharide biosynthetic process 4.7646E-7 4 32 3 6292
Golgi vesicle transport 4.9077E-7 4 168 4 6292
polysaccharide biosynthetic process 6.2849E-7 4 35 3 6292
cell wall organization or biogenesis 1.1612E-6 4 208 4 6292
cellular cell wall organization or biogenesis 1.1612E-6 4 208 4 6292
amine metabolic process 2.1722E-6 4 243 4 6292
cellular polysaccharide metabolic process 2.5132E-6 4 55 3 6292
carbohydrate metabolic process 3.8974E-6 4 281 4 6292
cellular carbohydrate biosynthetic process 7.2677E-6 4 78 3 6292
vesicle-mediated transport 8.3846E-6 4 340 4 6292
carbohydrate biosynthetic process 1.1588E-5 4 91 3 6292
intracellular transport 5.908E-5 4 553 4 6292
establishment of localization in cell 8.1397E-5 4 599 4 6292
cellular localization 1.0815E-4 4 643 4 6292
cellular component biogenesis 1.4687E-4 4 694 4 6292
cellular carbohydrate metabolic process 2.7682E-4 4 262 3 6292
transport 6.2722E-4 4 997 4 6292
cell wall macromolecule catabolic process 6.3573E-4 4 1 1 6292
cell wall chitin catabolic process 6.3573E-4 4 1 1 6292
establishment of localization 6.5541E-4 4 1008 4 6292
localization 8.0172E-4 4 1060 4 6292
cellular bud site selection 8.0639E-4 4 74 2 6292
cytokinesis, site selection 8.0639E-4 4 74 2 6292
cell cycle cytokinesis 9.4222E-4 4 80 2 6292
establishment of cell polarity 1.0385E-3 4 84 2 6292
establishment or maintenance of cell polarity 1.0633E-3 4 85 2 6292
cytokinetic process 1.2449E-3 4 92 2 6292
aminoglycan catabolic process 1.2712E-3 4 2 1 6292
chitin catabolic process 1.2712E-3 4 2 1 6292
cytokinesis 1.8408E-3 4 112 2 6292
cell morphogenesis 2.2887E-3 4 125 2 6292
cellular component morphogenesis 2.7838E-3 4 138 2 6292
cell division 3.0699E-3 4 145 2 6292
nitrogen compound metabolic process 6.5492E-3 4 1791 4 6292
polysaccharide catabolic process 6.9763E-3 4 11 1 6292
anatomical structure morphogenesis 9.4419E-3 4 257 2 6292
anatomical structure development 9.6577E-3 4 260 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T


YRC Informatics Platform - Version 3.0
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