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View Protein Complex Details

Complex Overview

From Publication: Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22.
Notes: From the published set of protein complexes (core proteins only)
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

preribosome 8.4748E-5 3 34 2 6292
cytosol 9.1032E-5 3 284 3 6292
cytosolic ribosome 7.5745E-4 3 101 2 6292
cytosolic part 1.1046E-3 3 122 2 6292
ribosomal subunit 2.4758E-3 3 183 2 6292
small-subunit processome 2.8585E-3 3 6 1 6292
preribosome, large subunit precursor 4.2857E-3 3 9 1 6292
ribosome 6.1581E-3 3 290 2 6292
90S preribosome 8.0849E-3 3 17 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 4.768E-4 3 1 1 6292
maturation of LSU-rRNA 4.768E-4 3 1 1 6292
CTP biosynthetic process 9.5344E-4 3 2 1 6292
pyrimidine ribonucleoside triphosphate metabolic process 9.5344E-4 3 2 1 6292
CTP metabolic process 9.5344E-4 3 2 1 6292
pyrimidine ribonucleotide metabolic process 9.5344E-4 3 2 1 6292
pyrimidine ribonucleoside triphosphate biosynthetic process 9.5344E-4 3 2 1 6292
pyrimidine ribonucleotide biosynthetic process 9.5344E-4 3 2 1 6292
rRNA processing 1.2156E-3 3 128 2 6292
rRNA metabolic process 1.3919E-3 3 137 2 6292
pyrimidine nucleoside triphosphate biosynthetic process 1.4299E-3 3 3 1 6292
pyrimidine nucleoside triphosphate metabolic process 1.9063E-3 3 4 1 6292
pyrimidine ribonucleoside metabolic process 1.9063E-3 3 4 1 6292
pyrimidine nucleotide biosynthetic process 2.8585E-3 3 6 1 6292
ncRNA processing 3.4084E-3 3 215 2 6292
pyrimidine nucleoside metabolic process 3.8101E-3 3 8 1 6292
pyrimidine nucleotide metabolic process 3.8101E-3 3 8 1 6292
ncRNA metabolic process 4.8516E-3 3 257 2 6292
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 6.1865E-3 3 13 1 6292
pyrimidine base biosynthetic process 7.6106E-3 3 16 1 6292
pyrimidine base metabolic process 8.5592E-3 3 18 1 6292
ribosome biogenesis 8.7172E-3 3 346 2 6292
ribonucleoside metabolic process 9.0332E-3 3 19 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

CTP synthase activity 9.5344E-4 3 2 1 6292
structural constituent of ribosome 3.3148E-3 3 212 2 6292
structural molecule activity 8.374E-3 3 339 2 6292

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