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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleotide-excision repair factor 2 complex 6.3568E-4 2 2 1 6292
repairosome 1.2712E-3 2 4 1 6292
nucleotide-excision repair complex 6.6645E-3 2 21 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

glycoprotein catabolic process 3.1786E-4 2 1 1 6292
protein deglycosylation 3.1786E-4 2 1 1 6292
proteolysis involved in cellular protein catabolic process 6.3467E-4 2 159 2 6292
negative regulation of protein catabolic process 6.3568E-4 2 2 1 6292
negative regulation of catabolic process 6.3568E-4 2 2 1 6292
cellular protein catabolic process 7.3441E-4 2 171 2 6292
proteolysis 8.8816E-4 2 188 2 6292
protein catabolic process 8.9766E-4 2 189 2 6292
misfolded or incompletely synthesized protein catabolic process 9.5344E-4 2 3 1 6292
cellular macromolecule catabolic process 1.7674E-3 2 265 2 6292
macromolecule catabolic process 2.1762E-3 2 294 2 6292
regulation of protein catabolic process 2.224E-3 2 7 1 6292
nucleotide-excision repair, DNA damage recognition 2.224E-3 2 7 1 6292
cellular catabolic process 4.3405E-3 2 415 2 6292
negative regulation of protein metabolic process 5.0798E-3 2 16 1 6292
catabolic process 6.2027E-3 2 496 2 6292
regulation of catabolic process 7.6148E-3 2 24 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity 3.1786E-4 2 1 1 6292
damaged DNA binding 3.4937E-3 2 11 1 6292
protein binding, bridging 6.3477E-3 2 20 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle