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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mitochondrial matrix 2.2913E-3 3 176 2 6292
mitochondrial lumen 2.2913E-3 3 176 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

isocitrate metabolic process 1.5153E-6 3 5 2 6292
glutamate biosynthetic process 1.1809E-5 3 13 2 6292
acetyl-CoA catabolic process 1.5894E-5 3 15 2 6292
tricarboxylic acid cycle 1.5894E-5 3 15 2 6292
glutamate metabolic process 2.3152E-5 3 18 2 6292
acetyl-CoA metabolic process 2.8745E-5 3 20 2 6292
coenzyme catabolic process 2.8745E-5 3 20 2 6292
cofactor catabolic process 3.4941E-5 3 22 2 6292
glutamine family amino acid biosynthetic process 5.7139E-5 3 28 2 6292
glutamine family amino acid metabolic process 1.3628E-4 3 43 2 6292
aerobic respiration 5.114E-4 3 83 2 6292
cellular respiration 6.9865E-4 3 97 2 6292
cellular amino acid biosynthetic process 9.6474E-4 3 114 2 6292
coenzyme metabolic process 1.0687E-3 3 120 2 6292
amine biosynthetic process 1.1046E-3 3 122 2 6292
organic acid biosynthetic process 1.4327E-3 3 139 2 6292
carboxylic acid biosynthetic process 1.4327E-3 3 139 2 6292
energy derivation by oxidation of organic compounds 1.6453E-3 3 149 2 6292
cofactor metabolic process 1.757E-3 3 154 2 6292
generation of precursor metabolites and energy 2.8085E-3 3 195 2 6292
cellular amino acid metabolic process 2.9239E-3 3 199 2 6292
cellular amine metabolic process 3.6317E-3 3 222 2 6292
amine metabolic process 4.3431E-3 3 243 2 6292
cellular amino acid and derivative metabolic process 4.3431E-3 3 243 2 6292
cellular nitrogen compound biosynthetic process 4.4856E-3 3 247 2 6292
small molecule biosynthetic process 7.0229E-3 3 310 2 6292
organic acid metabolic process 8.0851E-3 3 333 2 6292
oxoacid metabolic process 8.0851E-3 3 333 2 6292
carboxylic acid metabolic process 8.0851E-3 3 333 2 6292
cellular ketone metabolic process 8.7172E-3 3 346 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

isocitrate dehydrogenase (NAD+) activity 1.5158E-7 3 2 2 6292
isocitrate dehydrogenase activity 1.5153E-6 3 5 2 6292
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 3.9536E-4 3 73 2 6292
oxidoreductase activity, acting on CH-OH group of donors 4.8701E-4 3 81 2 6292
oxidoreductase activity 5.7868E-3 3 281 2 6292

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