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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ER to Golgi transport vesicle 4.8228E-10 4 31 4 6292
transport vesicle 2.2837E-9 4 45 4 6292
coated vesicle 2.8166E-8 4 83 4 6292
cytoplasmic vesicle 7.9099E-8 4 107 4 6292
membrane-bounded vesicle 7.9099E-8 4 107 4 6292
cytoplasmic membrane-bounded vesicle 7.9099E-8 4 107 4 6292
vesicle 8.8488E-8 4 110 4 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ER to Golgi vesicle-mediated transport 2.8166E-8 4 83 4 6292
Golgi vesicle transport 4.9077E-7 4 168 4 6292
vesicle-mediated transport 8.3846E-6 4 340 4 6292
intracellular transport 5.908E-5 4 553 4 6292
establishment of localization in cell 8.1397E-5 4 599 4 6292
cellular localization 1.0815E-4 4 643 4 6292
transport 6.2722E-4 4 997 4 6292
establishment of localization 6.5541E-4 4 1008 4 6292
localization 8.0172E-4 4 1060 4 6292
protein retention in ER lumen 4.4437E-3 4 7 1 6292
maintenance of protein localization in endoplasmic reticulum 4.4437E-3 4 7 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle