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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

GET complex 9.6394E-11 3 4 3 6292
endoplasmic reticulum part 1.3286E-5 3 150 3 6292
subsynaptic reticulum 1.3286E-5 3 150 3 6292
endoplasmic reticulum 1.9211E-4 3 364 3 6292
protein complex 5.8881E-3 3 1137 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

retrograde vesicle-mediated transport, Golgi to ER 6.2656E-8 3 26 3 6292
Golgi vesicle transport 1.8706E-5 3 168 3 6292
vesicle-mediated transport 1.5647E-4 3 340 3 6292
intracellular transport 6.7555E-4 3 553 3 6292
establishment of localization in cell 8.589E-4 3 599 3 6292
cellular localization 1.0628E-3 3 643 3 6292
transport 3.9684E-3 3 997 3 6292
establishment of localization 4.1014E-3 3 1008 3 6292
calcium ion homeostasis 4.2857E-3 3 9 1 6292
cellular calcium ion homeostasis 4.2857E-3 3 9 1 6292
localization 4.7701E-3 3 1060 3 6292
response to metal ion 8.5592E-3 3 18 1 6292
metal ion homeostasis 9.5071E-3 3 20 1 6292
response to unfolded protein 9.5071E-3 3 20 1 6292
response to biotic stimulus 9.5071E-3 3 20 1 6292
response to protein stimulus 9.5071E-3 3 20 1 6292
cellular metal ion homeostasis 9.5071E-3 3 20 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle