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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein modification by small protein conjugation or removal 5.7949E-6 3 114 3 6292
protein deubiquitination 3.1768E-5 3 21 2 6292
protein modification by small protein removal 6.1366E-5 3 29 2 6292
post-translational protein modification 1.8121E-4 3 357 3 6292
farnesyl diphosphate biosynthetic process, mevalonate pathway 4.768E-4 3 1 1 6292
protein modification process 4.9605E-4 3 499 3 6292
macromolecule modification 7.3601E-4 3 569 3 6292
terpenoid metabolic process 9.5344E-4 3 2 1 6292
farnesyl diphosphate biosynthetic process 9.5344E-4 3 2 1 6292
farnesyl diphosphate metabolic process 9.5344E-4 3 2 1 6292
terpenoid biosynthetic process 9.5344E-4 3 2 1 6292
prenol metabolic process 1.4299E-3 3 3 1 6292
prenol biosynthetic process 1.4299E-3 3 3 1 6292
polyprenol metabolic process 1.4299E-3 3 3 1 6292
polyprenol biosynthetic process 1.4299E-3 3 3 1 6292
secondary metabolic process 2.3825E-3 3 5 1 6292
isoprenoid metabolic process 2.8585E-3 3 6 1 6292
isoprenoid biosynthetic process 2.8585E-3 3 6 1 6292
cellular protein metabolic process 4.9618E-3 3 1074 3 6292
protein metabolic process 5.8726E-3 3 1136 3 6292
protein polyubiquitination 9.9809E-3 3 21 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ubiquitin-specific protease activity 9.5071E-3 3 20 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle