YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

regulation of translational elongation 2.3591E-5 4 13 2 6292
translational elongation 1.2238E-4 4 29 2 6292
regulation of translation 4.7822E-4 4 57 2 6292
posttranscriptional regulation of gene expression 5.4787E-4 4 61 2 6292
positive regulation of translational elongation 6.3573E-4 4 1 1 6292
regulation of cellular protein metabolic process 6.8098E-4 4 68 2 6292
regulation of protein metabolic process 8.0639E-4 4 74 2 6292
translation 8.0953E-4 4 376 3 6292
positive regulation of translation 2.5411E-3 4 4 1 6292
cellular biosynthetic process 3.8359E-3 4 1567 4 6292
biosynthetic process 4.1907E-3 4 1602 4 6292
positive regulation of cellular protein metabolic process 4.4437E-3 4 7 1 6292
positive regulation of protein metabolic process 5.0773E-3 4 8 1 6292
cellular amino acid metabolic process 5.7261E-3 4 199 2 6292
cellular amine metabolic process 7.0945E-3 4 222 2 6292
amine metabolic process 8.465E-3 4 243 2 6292
cellular amino acid and derivative metabolic process 8.465E-3 4 243 2 6292
branched chain family amino acid biosynthetic process 9.5041E-3 4 15 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

proline-tRNA ligase activity 1.2712E-3 4 2 1 6292
L-threonine ammonia-lyase activity 1.9063E-3 4 3 1 6292
ammonia-lyase activity 3.8098E-3 4 6 1 6292
carbon-nitrogen lyase activity 5.0773E-3 4 8 1 6292
translation elongation factor activity 6.9763E-3 4 11 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle