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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

DNA-directed RNA polymerase III complex 2.0582E-5 3 17 2 6292
RNA polymerase complex 7.0268E-5 3 31 2 6292
nuclear DNA-directed RNA polymerase complex 7.0268E-5 3 31 2 6292
DNA-directed RNA polymerase complex 7.0268E-5 3 31 2 6292
nucleoplasm part 4.414E-3 3 245 2 6292
nucleoplasm 5.1161E-3 3 264 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

transcription from RNA polymerase III promoter 2.033E-7 3 38 3 6292
negative regulation of transcription from RNA polymerase III promoter 4.768E-4 3 1 1 6292
transcription, DNA-dependent 5.081E-4 3 503 3 6292
RNA biosynthetic process 5.2344E-4 3 508 3 6292
transcription 6.7188E-4 3 552 3 6292
regulation of transcription from RNA polymerase III promoter 3.3344E-3 3 7 1 6292
RNA metabolic process 3.4763E-3 3 954 3 6292
cellular macromolecule biosynthetic process 6.7003E-3 3 1187 3 6292
macromolecule biosynthetic process 6.7343E-3 3 1189 3 6292
gene expression 8.4626E-3 3 1283 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

RNA polymerase activity 8.4748E-5 3 34 2 6292
DNA-directed RNA polymerase activity 8.4748E-5 3 34 2 6292
nucleotidyltransferase activity 2.089E-3 3 168 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle