| From Publication: | Riffle <i>et al</i>. (2010) (Unpublished Data) |
| Notes: | Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7 |
| Complex Size: | 3 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| SMD3 |
|
|
|
| SMX2 |
|
|
|
| SMX3 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| U5 snRNP | 8.7719E-9 | 3 | 14 | 3 | 6292 |
| U1 snRNP | 1.6387E-8 | 3 | 17 | 3 | 6292 |
| U4/U6 x U5 tri-snRNP complex | 1.1953E-7 | 3 | 32 | 3 | 6292 |
| small nuclear ribonucleoprotein complex | 9.5698E-7 | 3 | 63 | 3 | 6292 |
| ribonucleoprotein complex | 5.4224E-4 | 3 | 514 | 3 | 6292 |
| nuclear part | 5.3751E-3 | 3 | 1103 | 3 | 6292 |
| U2-type spliceosomal complex | 5.7116E-3 | 3 | 12 | 1 | 6292 |
| commitment complex | 5.7116E-3 | 3 | 12 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| nuclear mRNA splicing, via spliceosome | 3.7798E-6 | 3 | 99 | 3 | 6292 |
| RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | 3.8967E-6 | 3 | 100 | 3 | 6292 |
| RNA splicing, via transesterification reactions | 4.7832E-6 | 3 | 107 | 3 | 6292 |
| RNA splicing | 9.0288E-6 | 3 | 132 | 3 | 6292 |
| mRNA processing | 1.4956E-5 | 3 | 156 | 3 | 6292 |
| mRNA metabolic process | 3.8268E-5 | 3 | 213 | 3 | 6292 |
| RNA processing | 2.1865E-4 | 3 | 380 | 3 | 6292 |
| RNA metabolic process | 3.4763E-3 | 3 | 954 | 3 | 6292 |
| gene expression | 8.4626E-3 | 3 | 1283 | 3 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| RNA binding | 1.9692E-4 | 3 | 367 | 3 | 6292 |
| nucleic acid binding | 1.1811E-3 | 3 | 666 | 3 | 6292 |
| binding | 8.6823E-3 | 3 | 1294 | 3 | 6292 |