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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nuclear nucleosome 3.811E-3 2 12 1 6292
nucleosome 3.811E-3 2 12 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

phosphatidylcholine biosynthetic process 2.859E-3 2 9 1 6292
phosphatidylcholine metabolic process 3.4937E-3 2 11 1 6292
ethanolamine and derivative metabolic process 4.7627E-3 2 15 1 6292
nucleosome assembly 5.0798E-3 2 16 1 6292
chromatin assembly 6.0308E-3 2 19 1 6292
nucleosome organization 9.1975E-3 2 29 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

choline kinase activity 6.3568E-4 2 2 1 6292
histone binding 4.4455E-3 2 14 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle