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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

microsome 6.3477E-3 2 20 1 6292
vesicular fraction 6.3477E-3 2 20 1 6292
nucleoid 8.248E-3 2 26 1 6292
mitochondrial nucleoid 8.248E-3 2 26 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

threonine catabolic process 1.2712E-3 2 4 1 6292
serine family amino acid catabolic process 2.5415E-3 2 8 1 6292
threonine metabolic process 2.859E-3 2 9 1 6292
aspartate family amino acid catabolic process 2.859E-3 2 9 1 6292
phospholipid transport 3.811E-3 2 12 1 6292
cellular catabolic process 4.3405E-3 2 415 2 6292
catabolic process 6.2027E-3 2 496 2 6292
serine family amino acid metabolic process 8.5646E-3 2 27 1 6292
cellular amino acid catabolic process 9.5139E-3 2 30 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

L-threonine ammonia-lyase activity 9.5344E-4 2 3 1 6292
L-serine ammonia-lyase activity 1.2712E-3 2 4 1 6292
phosphatidylinositol transporter activity 1.5888E-3 2 5 1 6292
ammonia-lyase activity 1.9064E-3 2 6 1 6292
carbon-nitrogen lyase activity 2.5415E-3 2 8 1 6292
phospholipid transporter activity 4.4455E-3 2 14 1 6292
lipid transporter activity 6.0308E-3 2 19 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle