YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cell cortex 1.9981E-5 4 109 3 6292
cytoskeleton 1.5561E-4 4 216 3 6292
actin cortical patch 2.4654E-4 4 41 2 6292
cortical actin cytoskeleton 3.9774E-4 4 52 2 6292
cortical cytoskeleton 3.9774E-4 4 52 2 6292
non-membrane-bounded organelle 5.368E-4 4 959 4 6292
intracellular non-membrane-bounded organelle 5.368E-4 4 959 4 6292
actin cytoskeleton 1.0633E-3 4 85 2 6292
cell cortex part 1.355E-3 4 96 2 6292
cytoskeletal part 5.8395E-3 4 201 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

actin cytoskeleton organization 2.2273E-5 4 113 3 6292
actin filament-based process 2.4734E-5 4 117 3 6292
actin cortical patch assembly 2.7517E-5 4 14 2 6292
cortical actin cytoskeleton organization 3.1744E-5 4 15 2 6292
cortical cytoskeleton organization 3.1744E-5 4 15 2 6292
cytoskeleton organization 1.9015E-4 4 231 3 6292
actin filament organization 6.8098E-4 4 68 2 6292
regulation of endocytosis 1.9063E-3 4 3 1 6292
regulation of vesicle-mediated transport 3.8098E-3 4 6 1 6292
cellular component biogenesis 4.9063E-3 4 694 3 6292
ribosomal large subunit export from nucleus 5.7106E-3 4 9 1 6292
regulation of transport 6.9763E-3 4 11 1 6292
regulation of localization 6.9763E-3 4 11 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

microtubule binding 6.3436E-3 4 10 1 6292
actin filament binding 7.6087E-3 4 12 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle