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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 8 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

proteasome accessory complex 8.0839E-21 8 23 8 6292
proteasome regulatory particle 8.0839E-21 8 23 8 6292
proteasome complex 6.2214E-18 8 48 8 6292
proteasome regulatory particle, base subcomplex 1.3484E-10 8 9 4 6292
proteasome regulatory particle, lid subcomplex 1.6127E-7 8 10 3 6292
protein complex 1.1143E-6 8 1137 8 6292
macromolecular complex 2.0527E-5 8 1635 8 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ubiquitin-dependent protein catabolic process 1.1951E-13 8 156 8 6292
modification-dependent protein catabolic process 1.1951E-13 8 156 8 6292
proteolysis involved in cellular protein catabolic process 1.3967E-13 8 159 8 6292
modification-dependent macromolecule catabolic process 1.7992E-13 8 164 8 6292
cellular protein catabolic process 2.5317E-13 8 171 8 6292
proteolysis 5.4869E-13 8 188 8 6292
protein catabolic process 5.7294E-13 8 189 8 6292
cellular macromolecule catabolic process 8.9385E-12 8 265 8 6292
macromolecule catabolic process 2.0734E-11 8 294 8 6292
cellular catabolic process 3.3615E-10 8 415 8 6292
catabolic process 1.4153E-9 8 496 8 6292
cellular protein metabolic process 7.0519E-7 8 1074 8 6292
protein metabolic process 1.1064E-6 8 1136 8 6292
cellular macromolecule metabolic process 3.0018E-4 8 2285 8 6292
macromolecule metabolic process 3.7455E-4 8 2349 8 6292
primary metabolic process 2.0036E-3 8 2896 8 6292
cellular metabolic process 2.9013E-3 8 3033 8 6292
metabolic process 3.9991E-3 8 3157 8 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

endopeptidase activity 2.1167E-9 8 54 5 6292
peptidase activity, acting on L-amino acid peptides 3.8147E-8 8 95 5 6292
peptidase activity 1.3061E-6 8 192 5 6292
ATPase activity 1.8378E-3 8 211 3 6292
hydrolase activity 2.4085E-3 8 911 5 6292
nucleoside-triphosphatase activity 6.5162E-3 8 329 3 6292
hydrolase activity, acting on acid anhydrides 7.936E-3 8 353 3 6292
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 7.936E-3 8 353 3 6292
pyrophosphatase activity 7.936E-3 8 353 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle