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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosol 2.0305E-3 2 284 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

'de novo' IMP biosynthetic process 6.0632E-6 2 16 2 6292
IMP biosynthetic process 6.8716E-6 2 17 2 6292
IMP metabolic process 6.8716E-6 2 17 2 6292
purine ribonucleoside monophosphate biosynthetic process 8.6401E-6 2 19 2 6292
ribonucleoside monophosphate biosynthetic process 9.6001E-6 2 20 2 6292
purine nucleoside monophosphate biosynthetic process 9.6001E-6 2 20 2 6292
purine ribonucleoside monophosphate metabolic process 1.3945E-5 2 24 2 6292
ribonucleoside monophosphate metabolic process 1.5158E-5 2 25 2 6292
purine nucleoside monophosphate metabolic process 1.5158E-5 2 25 2 6292
nucleoside monophosphate biosynthetic process 1.7735E-5 2 27 2 6292
nucleoside monophosphate metabolic process 2.5061E-5 2 32 2 6292
purine ribonucleotide biosynthetic process 4.3504E-5 2 42 2 6292
ribonucleotide biosynthetic process 5.0022E-5 2 45 2 6292
purine nucleotide biosynthetic process 5.9419E-5 2 49 2 6292
purine ribonucleotide metabolic process 6.6999E-5 2 52 2 6292
ribonucleotide metabolic process 7.5032E-5 2 55 2 6292
purine nucleotide metabolic process 8.3521E-5 2 58 2 6292
nucleotide biosynthetic process 1.2202E-4 2 70 2 6292
nucleobase, nucleoside, nucleotide and nucleic acid biosynthetic process 2.0236E-4 2 90 2 6292
nucleobase, nucleoside and nucleotide biosynthetic process 2.0236E-4 2 90 2 6292
nucleotide metabolic process 4.1068E-4 2 128 2 6292
nucleoside phosphate metabolic process 4.1068E-4 2 128 2 6292
nucleobase, nucleoside and nucleotide metabolic process 6.1875E-4 2 157 2 6292
heterocycle metabolic process 7.3441E-4 2 171 2 6292
cellular nitrogen compound biosynthetic process 1.5351E-3 2 247 2 6292
small molecule biosynthetic process 2.42E-3 2 310 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

phosphoribosylaminoimidazolecarboxamide formyltransferase activity 1.5158E-7 2 3 2 6292
IMP cyclohydrolase activity 1.5158E-7 2 3 2 6292
hydroxymethyl-, formyl- and related transferase activity 1.0611E-6 2 7 2 6292
glycine hydroxymethyltransferase activity 2.2737E-6 2 10 2 6292
cyclohydrolase activity 2.2737E-6 2 10 2 6292
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 1.2783E-5 2 23 2 6292
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 1.5966E-4 2 80 2 6292
methyltransferase activity 2.304E-4 2 96 2 6292
transferase activity, transferring one-carbon groups 2.4511E-4 2 99 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle