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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

signal recognition particle 3.3344E-3 3 7 1 6292
signal recognition particle, endoplasmic reticulum targeting 3.3344E-3 3 7 1 6292
cytosol 5.9093E-3 3 284 2 6292
90S preribosome 8.0849E-3 3 17 1 6292
microsome 9.5071E-3 3 20 1 6292
vesicular fraction 9.5071E-3 3 20 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cellular macromolecular complex assembly 2.449E-3 3 182 2 6292
SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition 3.3344E-3 3 7 1 6292
cellular macromolecular complex subunit organization 4.9265E-3 3 259 2 6292
phospholipid transport 5.7116E-3 3 12 1 6292
macromolecular complex assembly 5.7868E-3 3 281 2 6292
ribosomal small subunit assembly 6.6614E-3 3 14 1 6292
macromolecular complex subunit organization 9.2699E-3 3 357 2 6292
SRP-dependent cotranslational protein targeting to membrane 9.9809E-3 3 21 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

phosphatidylinositol transporter activity 2.3825E-3 3 5 1 6292
phospholipid transporter activity 6.6614E-3 3 14 1 6292
lipid transporter activity 9.0332E-3 3 19 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle