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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 8 proteins

Complex Member Proteins

Protein

GO Cellular Component GO Biological Process GO Molecular Function
RPS11A, RPS11B
  • ribonucleoprotein complex
  • cytosolic small ribosomal subunit
  • cytoplasm
  • ribosome
  • 90S preribosome
  • intracellular
  • regulation of translation
  • maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
  • ribosomal small subunit assembly
  • translation
  • RNA binding
  • structural constituent of ribosome
  • rRNA binding
  • RPS13
  • ribonucleoprotein complex
  • cytosolic small ribosomal subunit
  • cytoplasm
  • 90S preribosome
  • ribosome
  • intracellular
  • translation
  • structural constituent of ribosome
  • RPS17B
  • ribonucleoprotein complex
  • cytosolic small ribosomal subunit
  • cytoplasm
  • ribosome
  • intracellular
  • telomere maintenance
  • ribosomal small subunit assembly
  • translation
  • structural constituent of ribosome
  • RPS22A
  • ribonucleoprotein complex
  • cytoplasm
  • cytosolic small ribosomal subunit
  • ribosome
  • intracellular
  • telomere maintenance
  • translation
  • structural constituent of ribosome
  • RPS24A, RPS24B
  • ribonucleoprotein complex
  • cytoplasm
  • cytosolic small ribosomal subunit
  • mitochondrion
  • ribosome
  • intracellular
  • regulation of translation
  • maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
  • translation
  • nucleotide binding
  • structural constituent of ribosome
  • RPS5
  • ribonucleoprotein complex
  • cytosolic small ribosomal subunit
  • cytoplasm
  • small ribosomal subunit
  • 90S preribosome
  • ribosome
  • intracellular
  • translation
  • structural constituent of ribosome
  • RPS7A
  • small nucleolar ribonucleoprotein complex
  • translation
  • structural constituent of ribosome
  • RPS8B, RPS8A
  • ribonucleoprotein complex
  • cytosolic small ribosomal subunit
  • cytoplasm
  • 90S preribosome
  • ribosome
  • intracellular
  • regulation of translation
  • maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
  • translation
  • structural constituent of ribosome
  • Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    cytosolic small ribosomal subunit 1.3021E-15 8 38 7 6292
    small ribosomal subunit 1.6728E-13 8 73 7 6292
    cytosolic ribosome 1.7589E-12 8 101 7 6292
    cytosolic part 6.8298E-12 8 122 7 6292
    ribosomal subunit 1.2273E-10 8 183 7 6292
    ribonucleoprotein complex 1.8861E-9 8 514 8 6292
    90S preribosome 2.5367E-9 8 17 4 6292
    cytosol 2.7341E-9 8 284 7 6292
    ribosome 3.1671E-9 8 290 7 6292
    preribosome 4.9003E-8 8 34 4 6292
    non-membrane-bounded organelle 1.3016E-5 8 959 7 6292
    intracellular non-membrane-bounded organelle 1.3016E-5 8 959 7 6292
    macromolecular complex 2.0527E-5 8 1635 8 6292
    organelle part 4.4856E-3 8 2282 7 6292
    intracellular organelle part 4.4856E-3 8 2282 7 6292
    cytoplasmic part 7.7532E-3 8 2482 7 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    translation 1.5155E-10 8 376 8 6292
    maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 3.8367E-7 8 13 3 6292
    cellular protein metabolic process 7.0519E-7 8 1074 8 6292
    protein metabolic process 1.1064E-6 8 1136 8 6292
    cellular macromolecule biosynthetic process 1.5738E-6 8 1187 8 6292
    macromolecule biosynthetic process 1.5953E-6 8 1189 8 6292
    gene expression 2.9372E-6 8 1283 8 6292
    cellular biosynthetic process 1.4602E-5 8 1567 8 6292
    biosynthetic process 1.7431E-5 8 1602 8 6292
    regulation of translation 3.8233E-5 8 57 3 6292
    maturation of SSU-rRNA 4.2427E-5 8 59 3 6292
    posttranscriptional regulation of gene expression 4.6914E-5 8 61 3 6292
    regulation of cellular protein metabolic process 6.5054E-5 8 68 3 6292
    regulation of protein metabolic process 8.3843E-5 8 74 3 6292
    ribosomal small subunit assembly 1.2776E-4 8 14 2 6292
    cellular macromolecule metabolic process 3.0018E-4 8 2285 8 6292
    macromolecule metabolic process 3.7455E-4 8 2349 8 6292
    rRNA processing 4.2742E-4 8 128 3 6292
    ribosomal small subunit biogenesis 4.5282E-4 8 26 2 6292
    rRNA metabolic process 5.2205E-4 8 137 3 6292
    ribosome biogenesis 5.2727E-4 8 346 4 6292
    ribonucleoprotein complex biogenesis 7.1014E-4 8 374 4 6292
    ncRNA processing 1.9402E-3 8 215 3 6292
    primary metabolic process 2.0036E-3 8 2896 8 6292
    ribosomal subunit assembly 2.0312E-3 8 55 2 6292
    ribosome assembly 2.7417E-3 8 64 2 6292
    cellular metabolic process 2.9013E-3 8 3033 8 6292
    organelle assembly 3.1803E-3 8 69 2 6292
    ncRNA metabolic process 3.2376E-3 8 257 3 6292
    metabolic process 3.9991E-3 8 3157 8 6292
    ribonucleoprotein complex assembly 5.5921E-3 8 92 2 6292
    cellular component biogenesis 7.1352E-3 8 694 4 6292
    biological regulation 8.8033E-3 8 1213 5 6292
    RNA processing 9.7426E-3 8 380 3 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    structural constituent of ribosome 1.4597E-12 8 212 8 6292
    structural molecule activity 6.5627E-11 8 339 8 6292

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle