YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic small ribosomal subunit 1.2735E-10 7 38 5 6292
90S preribosome 1.2705E-9 7 17 4 6292
small ribosomal subunit 3.7754E-9 7 73 5 6292
cytosolic ribosome 1.9761E-8 7 101 5 6292
preribosome 2.4595E-8 7 34 4 6292
cytosolic part 5.1422E-8 7 122 5 6292
ribosomal subunit 3.9497E-7 7 183 5 6292
ribonucleoprotein complex 1.8849E-6 7 514 6 6292
cytosol 3.5275E-6 7 284 5 6292
ribosome 3.9127E-6 7 290 5 6292
non-membrane-bounded organelle 7.5345E-5 7 959 6 6292
intracellular non-membrane-bounded organelle 7.5345E-5 7 959 6 6292
macromolecular complex 1.6651E-3 7 1635 6 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 2.915E-7 7 376 6 6292
gene expression 1.4468E-5 7 1283 7 6292
regulation of translation 2.405E-5 7 57 3 6292
posttranscriptional regulation of gene expression 2.9525E-5 7 61 3 6292
regulation of cellular protein metabolic process 4.0976E-5 7 68 3 6292
regulation of protein metabolic process 5.2849E-5 7 74 3 6292
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 8.2282E-5 7 13 2 6292
ribosomal small subunit assembly 9.5944E-5 7 14 2 6292
cellular protein metabolic process 1.4622E-4 7 1074 6 6292
protein metabolic process 2.0289E-4 7 1136 6 6292
cellular macromolecule biosynthetic process 2.6203E-4 7 1187 6 6292
macromolecule biosynthetic process 2.6461E-4 7 1189 6 6292
rRNA processing 2.7117E-4 7 128 3 6292
ribosome biogenesis 2.7556E-4 7 346 4 6292
rRNA metabolic process 3.3156E-4 7 137 3 6292
ribosomal small subunit biogenesis 3.4048E-4 7 26 2 6292
ribonucleoprotein complex biogenesis 3.725E-4 7 374 4 6292
cellular macromolecule metabolic process 8.282E-4 7 2285 7 6292
macromolecule metabolic process 1.0051E-3 7 2349 7 6292
ncRNA processing 1.2438E-3 7 215 3 6292
cellular biosynthetic process 1.3053E-3 7 1567 6 6292
biosynthetic process 1.4816E-3 7 1602 6 6292
ribosomal subunit assembly 1.532E-3 7 55 2 6292
maturation of SSU-rRNA 1.7614E-3 7 59 2 6292
ribosome assembly 2.0698E-3 7 64 2 6292
ncRNA metabolic process 2.0862E-3 7 257 3 6292
organelle assembly 2.4022E-3 7 69 2 6292
cellular component biogenesis 3.9065E-3 7 694 4 6292
ribonucleoprotein complex assembly 4.2342E-3 7 92 2 6292
primary metabolic process 4.3588E-3 7 2896 7 6292
cellular metabolic process 6.026E-3 7 3033 7 6292
RNA processing 6.3721E-3 7 380 3 6292
metabolic process 7.9792E-3 7 3157 7 6292
regulation of gene expression 9.92E-3 7 445 3 6292
regulation of translational fidelity 9.9746E-3 7 9 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 9.2906E-9 7 212 6 6292
structural molecule activity 1.5671E-7 7 339 6 6292
ribonucleoprotein binding 7.7654E-3 7 7 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle