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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mating projection base 4.4437E-3 4 7 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mannose biosynthetic process 1.2712E-3 4 2 1 6292
GDP-mannose metabolic process 1.2712E-3 4 2 1 6292
GDP-mannose biosynthetic process 1.2712E-3 4 2 1 6292
nucleotide-sugar biosynthetic process 1.2712E-3 4 2 1 6292
mannose metabolic process 3.8098E-3 4 6 1 6292
nucleotide-sugar metabolic process 4.4437E-3 4 7 1 6292
mannoprotein biosynthetic process 8.2408E-3 4 13 1 6292
mannoprotein metabolic process 8.2408E-3 4 13 1 6292
cell wall glycoprotein biosynthetic process 8.2408E-3 4 13 1 6292
cell wall mannoprotein biosynthetic process 8.2408E-3 4 13 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mannose-1-phosphate guanylyltransferase activity 6.3573E-4 4 1 1 6292
mannose-phosphate guanylyltransferase activity 6.3573E-4 4 1 1 6292
glutamate dehydrogenase activity 1.2712E-3 4 2 1 6292
guanylyltransferase activity 1.9063E-3 4 3 1 6292
oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor 2.5411E-3 4 4 1 6292
oxidoreductase activity, acting on the CH-NH2 group of donors 7.6087E-3 4 12 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle