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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nuclear exosome (RNase complex) 4.7627E-3 2 15 1 6292
exosome (RNase complex) 5.0798E-3 2 16 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

termination of RNA polymerase II transcription 8.6401E-6 2 19 2 6292
transcription termination 1.0611E-5 2 21 2 6292
cellular protein complex disassembly 3.744E-5 2 39 2 6292
protein complex disassembly 3.744E-5 2 39 2 6292
macromolecular complex disassembly 3.9411E-5 2 40 2 6292
cellular macromolecular complex disassembly 3.9411E-5 2 40 2 6292
cellular component disassembly 4.7798E-5 2 44 2 6292
snRNA processing 9.5344E-4 2 3 1 6292
cellular macromolecular complex subunit organization 1.6882E-3 2 259 2 6292
snoRNA processing 2.224E-3 2 7 1 6292
transcription from RNA polymerase II promoter 2.8267E-3 2 335 2 6292
termination of RNA polymerase II transcription, poly(A)-independent 2.859E-3 2 9 1 6292
snRNA metabolic process 2.859E-3 2 9 1 6292
macromolecular complex subunit organization 3.2108E-3 2 357 2 6292
snoRNA metabolic process 5.7138E-3 2 18 1 6292
transcription, DNA-dependent 6.3792E-3 2 503 2 6292
RNA biosynthetic process 6.5067E-3 2 508 2 6292
transcription 7.6839E-3 2 552 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

RNA polymerase II transcription termination factor activity 3.1786E-4 2 1 1 6292
transcription termination factor activity 6.3568E-4 2 2 1 6292
5'-3' DNA helicase activity 2.5415E-3 2 8 1 6292
RNA-dependent ATPase activity 9.1975E-3 2 29 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle