| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.084] [SVM Score: 0.447876477252] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| ENO2 |
|
|
|
| LEU1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| soluble fraction | 5.2295E-5 | 2 | 46 | 2 | 6292 |
| cell fraction | 4.1715E-4 | 2 | 129 | 2 | 6292 |
| phosphopyruvate hydratase complex | 9.5344E-4 | 2 | 3 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| regulation of vacuole fusion, non-autophagic | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| regulation of vacuole organization | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| leucine biosynthetic process | 1.9064E-3 | 2 | 6 | 1 | 6292 |
| small molecule biosynthetic process | 2.42E-3 | 2 | 310 | 2 | 6292 |
| leucine metabolic process | 2.5415E-3 | 2 | 8 | 1 | 6292 |
| organic acid metabolic process | 2.793E-3 | 2 | 333 | 2 | 6292 |
| oxoacid metabolic process | 2.793E-3 | 2 | 333 | 2 | 6292 |
| carboxylic acid metabolic process | 2.793E-3 | 2 | 333 | 2 | 6292 |
| cellular ketone metabolic process | 3.0157E-3 | 2 | 346 | 2 | 6292 |
| branched chain family amino acid biosynthetic process | 4.7627E-3 | 2 | 15 | 1 | 6292 |
| branched chain family amino acid metabolic process | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| glycolysis | 7.9314E-3 | 2 | 25 | 1 | 6292 |
| vacuole fusion, non-autophagic | 8.5646E-3 | 2 | 27 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| hydro-lyase activity | 1.7735E-5 | 2 | 27 | 2 | 6292 |
| carbon-oxygen lyase activity | 3.1832E-5 | 2 | 36 | 2 | 6292 |
| lyase activity | 1.9342E-4 | 2 | 88 | 2 | 6292 |
| 3-isopropylmalate dehydratase activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| phosphopyruvate hydratase activity | 1.2712E-3 | 2 | 4 | 1 | 6292 |