YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.099] [SVM Score: 0.47079946848]
Complex Size: 2 proteins

Complex Member Proteins

Protein

 GO Cellular Component GO Biological Process GO Molecular Function
CDC13
  • nuclear telomere cap complex
    		•
  • telomere maintenance
  • telomere capping
    		•
  • telomeric DNA binding
    		•
    TEN1
  • nuclear telomere cap complex
    		•
  • telomere capping
    		•
  • telomeric DNA binding
    		•

    Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    telomere cap complex 2.779E-6 2 11 2 6292
    nuclear telomere cap complex 2.779E-6 2 11 2 6292
    nuclear chromosome, telomeric region 1.2783E-5 2 23 2 6292
    chromosome, telomeric region 1.7735E-5 2 27 2 6292
    protein-DNA complex 8.0641E-5 2 57 2 6292
    nuclear chromosome part 9.0721E-4 2 190 2 6292
    nuclear chromosome 1.3075E-3 2 228 2 6292
    chromosomal part 1.413E-3 2 237 2 6292
    chromosome 1.8898E-3 2 274 2 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    telomere capping 5.0527E-7 2 5 2 6292
    telomere maintenance 2.0592E-3 2 286 2 6292
    anatomical structure homeostasis 2.0592E-3 2 286 2 6292
    telomere organization 2.0592E-3 2 286 2 6292
    homeostatic process 4.1951E-3 2 408 2 6292
    regulation of biological quality 7.6561E-3 2 551 2 6292
    chromosome organization 7.7677E-3 2 555 2 6292
    DNA metabolic process 8.631E-3 2 585 2 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    telomeric DNA binding 3.3348E-6 2 12 2 6292
    sequence-specific DNA binding 6.1895E-5 2 50 2 6292
    DNA binding 1.6492E-3 2 256 2 6292
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle