From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.496029924092] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
AI2 |
|
|
|
SEN15 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
tRNA-intron endonuclease complex | 1.5888E-3 | 2 | 5 | 1 | 6292 |
nuclear inner membrane | 3.4937E-3 | 2 | 11 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
RNA splicing | 4.3685E-4 | 2 | 132 | 2 | 6292 |
RNA processing | 3.6384E-3 | 2 | 380 | 2 | 6292 |
tRNA splicing, via endonucleolytic cleavage and ligation | 5.0798E-3 | 2 | 16 | 1 | 6292 |
RNA splicing, via endonucleolytic cleavage and ligation | 5.0798E-3 | 2 | 16 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
endonuclease activity | 9.2464E-5 | 2 | 61 | 2 | 6292 |
nuclease activity | 9.9543E-4 | 2 | 199 | 2 | 6292 |
tRNA-intron endonuclease activity | 1.5888E-3 | 2 | 5 | 1 | 6292 |
endoribonuclease activity, producing 3'-phosphomonoesters | 1.5888E-3 | 2 | 5 | 1 | 6292 |
endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | 2.859E-3 | 2 | 9 | 1 | 6292 |
hydrolase activity, acting on ester bonds | 2.929E-3 | 2 | 341 | 2 | 6292 |
tRNA-specific ribonuclease activity | 4.7627E-3 | 2 | 15 | 1 | 6292 |
endoribonuclease activity | 8.5646E-3 | 2 | 27 | 1 | 6292 |