From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.506575938873] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
DYN3 |
|
|
|
PAC1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
cytoplasmic microtubule | 4.5979E-6 | 2 | 14 | 2 | 6292 |
microtubule | 2.3495E-5 | 2 | 31 | 2 | 6292 |
microtubule cytoskeleton | 2.8118E-4 | 2 | 106 | 2 | 6292 |
cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
cytoplasmic dynein complex | 1.2712E-3 | 2 | 4 | 1 | 6292 |
dynein complex | 1.2712E-3 | 2 | 4 | 1 | 6292 |
microtubule associated complex | 5.7138E-3 | 2 | 18 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
microtubule-based movement | 6.0632E-6 | 2 | 16 | 2 | 6292 |
nuclear migration along microtubule | 6.0632E-6 | 2 | 16 | 2 | 6292 |
microtubule-based transport | 6.0632E-6 | 2 | 16 | 2 | 6292 |
cytoskeleton-dependent intracellular transport | 7.7306E-6 | 2 | 18 | 2 | 6292 |
establishment of nucleus localization | 9.6001E-6 | 2 | 20 | 2 | 6292 |
nuclear migration | 9.6001E-6 | 2 | 20 | 2 | 6292 |
nucleus localization | 9.6001E-6 | 2 | 20 | 2 | 6292 |
establishment of organelle localization | 7.5032E-5 | 2 | 55 | 2 | 6292 |
organelle localization | 1.8038E-4 | 2 | 85 | 2 | 6292 |
microtubule-based process | 3.0847E-4 | 2 | 111 | 2 | 6292 |
intracellular transport | 7.7118E-3 | 2 | 553 | 2 | 6292 |
establishment of localization in cell | 9.0494E-3 | 2 | 599 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
motor activity | 5.7138E-3 | 2 | 18 | 1 | 6292 |