| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.084] [SVM Score: 0.50837567147] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| KAR3 |
|
|
|
| PAC1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| microtubule | 2.3495E-5 | 2 | 31 | 2 | 6292 |
| microtubule cytoskeleton | 2.8118E-4 | 2 | 106 | 2 | 6292 |
| cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
| cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
| cytoplasmic microtubule | 4.4455E-3 | 2 | 14 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| microtubule-based movement | 5.0798E-3 | 2 | 16 | 1 | 6292 |
| microtubule-based transport | 5.0798E-3 | 2 | 16 | 1 | 6292 |
| nuclear migration along microtubule | 5.0798E-3 | 2 | 16 | 1 | 6292 |
| cytoskeleton-dependent intracellular transport | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| karyogamy involved in conjugation with cellular fusion | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| karyogamy | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| nuclear migration | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| nucleus localization | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| establishment of nucleus localization | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| mitotic sister chromatid cohesion | 7.2981E-3 | 2 | 23 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| microtubule motor activity | 3.1764E-3 | 2 | 10 | 1 | 6292 |
| motor activity | 5.7138E-3 | 2 | 18 | 1 | 6292 |