| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.541333084416] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| SHO1 |
|
|
|
| SLG1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| plasma membrane | 1.8077E-3 | 2 | 268 | 2 | 6292 |
| actin cap | 3.811E-3 | 2 | 12 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| response to osmotic stress | 1.4784E-4 | 2 | 77 | 2 | 6292 |
| response to abiotic stimulus | 3.4287E-4 | 2 | 117 | 2 | 6292 |
| signaling pathway | 8.5067E-4 | 2 | 184 | 2 | 6292 |
| osmosensory signaling pathway via Sho1 osmosensor | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| signaling | 1.598E-3 | 2 | 252 | 2 | 6292 |
| response to stress | 6.2277E-3 | 2 | 497 | 2 | 6292 |
| Rho protein signal transduction | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| osmosensory signaling pathway | 6.6645E-3 | 2 | 21 | 1 | 6292 |
| cellular response to abiotic stimulus | 6.9813E-3 | 2 | 22 | 1 | 6292 |
| cellular response to osmotic stress | 6.9813E-3 | 2 | 22 | 1 | 6292 |
| response to heat | 7.6148E-3 | 2 | 24 | 1 | 6292 |
| response to temperature stimulus | 9.8303E-3 | 2 | 31 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| transmembrane receptor activity | 2.779E-6 | 2 | 11 | 2 | 6292 |
| receptor activity | 4.5979E-6 | 2 | 14 | 2 | 6292 |
| molecular transducer activity | 1.5966E-4 | 2 | 80 | 2 | 6292 |
| signal transducer activity | 1.5966E-4 | 2 | 80 | 2 | 6292 |
| osmosensor activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |