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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.563838633683]
Complex Size: 2 proteins

Complex Member Proteins

Protein

 GO Cellular Component GO Biological Process GO Molecular Function
GIP3
  • cytoplasm
  • mitochondrion
  • endoplasmic reticulum
  • ribosome
    		•
  • chromosome segregation
  • regulation of phosphoprotein phosphatase activity
    		•
  • protein phosphatase type 1 regulator activity
  • protein phosphatase 1 binding
    		•
    GIP4
  • cytoplasm
    		•
  • chromosome segregation
  • regulation of phosphoprotein phosphatase activity
    		•
  • protein phosphatase type 1 regulator activity
  • protein phosphatase 1 binding
    		•

    Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    regulation of phosphoprotein phosphatase activity 1.5158E-7 2 3 2 6292
    regulation of phosphatase activity 1.5158E-7 2 3 2 6292
    regulation of dephosphorylation 1.5158E-7 2 3 2 6292
    regulation of hydrolase activity 1.819E-6 2 9 2 6292
    regulation of phosphorus metabolic process 3.552E-5 2 38 2 6292
    regulation of phosphate metabolic process 3.552E-5 2 38 2 6292
    dephosphorylation 3.9411E-5 2 40 2 6292
    regulation of molecular function 4.7798E-5 2 44 2 6292
    regulation of catalytic activity 4.7798E-5 2 44 2 6292
    chromosome segregation 4.1068E-4 2 128 2 6292
    phosphorus metabolic process 1.3191E-3 2 229 2 6292
    phosphate metabolic process 1.3191E-3 2 229 2 6292
    regulation of cellular metabolic process 7.2445E-3 2 536 2 6292
    regulation of metabolic process 7.5452E-3 2 547 2 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    phosphatase binding 1.5158E-7 2 3 2 6292
    protein phosphatase binding 1.5158E-7 2 3 2 6292
    protein phosphatase 1 binding 1.5158E-7 2 3 2 6292
    protein phosphatase type 1 regulator activity 3.3348E-6 2 12 2 6292
    enzyme binding 4.5979E-6 2 14 2 6292
    phosphatase regulator activity 1.2783E-5 2 23 2 6292
    protein phosphatase regulator activity 1.2783E-5 2 23 2 6292
    enzyme regulator activity 1.0773E-3 2 207 2 6292
    protein binding 9.4468E-3 2 612 2 6292
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle