From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.054] [SVM Score: 0.60339920312] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
ARP10 |
|
|
|
KIP1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
microtubule associated complex | 7.7306E-6 | 2 | 18 | 2 | 6292 |
microtubule cytoskeleton | 2.8118E-4 | 2 | 106 | 2 | 6292 |
cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
dynactin complex | 1.2712E-3 | 2 | 4 | 1 | 6292 |
kinesin complex | 2.224E-3 | 2 | 7 | 1 | 6292 |
spindle microtubule | 5.3968E-3 | 2 | 17 | 1 | 6292 |
microtubule | 9.8303E-3 | 2 | 31 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
mitosis | 2.7062E-4 | 2 | 104 | 2 | 6292 |
nuclear division | 2.8118E-4 | 2 | 106 | 2 | 6292 |
organelle fission | 3.1973E-4 | 2 | 113 | 2 | 6292 |
M phase of mitotic cell cycle | 4.1068E-4 | 2 | 128 | 2 | 6292 |
mitotic cell cycle | 1.6363E-3 | 2 | 255 | 2 | 6292 |
mitotic anaphase B | 1.9064E-3 | 2 | 6 | 1 | 6292 |
M phase | 2.1762E-3 | 2 | 294 | 2 | 6292 |
anaphase | 2.224E-3 | 2 | 7 | 1 | 6292 |
mitotic anaphase | 2.224E-3 | 2 | 7 | 1 | 6292 |
cell cycle phase | 3.5621E-3 | 2 | 376 | 2 | 6292 |
cell cycle process | 6.0534E-3 | 2 | 490 | 2 | 6292 |
cell cycle | 6.95E-3 | 2 | 525 | 2 | 6292 |
microtubule nucleation | 7.2981E-3 | 2 | 23 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
structural constituent of cytoskeleton | 6.9626E-5 | 2 | 53 | 2 | 6292 |
structural molecule activity | 2.8947E-3 | 2 | 339 | 2 | 6292 |
microtubule motor activity | 3.1764E-3 | 2 | 10 | 1 | 6292 |
motor activity | 5.7138E-3 | 2 | 18 | 1 | 6292 |