From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.038] [SVM Score: 0.604790589548] |
Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
cell cortex | 2.974E-4 | 2 | 109 | 2 | 6292 |
cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
spindle microtubule | 5.3968E-3 | 2 | 17 | 1 | 6292 |
microtubule | 9.8303E-3 | 2 | 31 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
cytoskeleton organization | 1.3422E-3 | 2 | 231 | 2 | 6292 |
mitotic anaphase B | 1.9064E-3 | 2 | 6 | 1 | 6292 |
anaphase | 2.224E-3 | 2 | 7 | 1 | 6292 |
mitotic anaphase | 2.224E-3 | 2 | 7 | 1 | 6292 |
reproduction | 2.7096E-3 | 2 | 328 | 2 | 6292 |
karyogamy involved in conjugation with cellular fusion | 5.7138E-3 | 2 | 18 | 1 | 6292 |
karyogamy | 5.7138E-3 | 2 | 18 | 1 | 6292 |
cell cycle process | 6.0534E-3 | 2 | 490 | 2 | 6292 |
mitotic spindle elongation | 6.6645E-3 | 2 | 21 | 1 | 6292 |
spindle elongation | 6.6645E-3 | 2 | 21 | 1 | 6292 |
cell cycle | 6.95E-3 | 2 | 525 | 2 | 6292 |
mitotic spindle organization in nucleus | 8.248E-3 | 2 | 26 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
cytoskeletal protein binding | 8.6451E-5 | 2 | 59 | 2 | 6292 |
microtubule binding | 3.1764E-3 | 2 | 10 | 1 | 6292 |
tubulin binding | 6.3477E-3 | 2 | 20 | 1 | 6292 |
actin binding | 6.6645E-3 | 2 | 21 | 1 | 6292 |
protein binding | 9.4468E-3 | 2 | 612 | 2 | 6292 |