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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.038] [SVM Score: 0.65326829067]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

water transport 1.5158E-7 2 3 2 6292
fluid transport 1.5158E-7 2 3 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

water transmembrane transporter activity 1.5158E-7 2 3 2 6292
water channel activity 1.5158E-7 2 3 2 6292
channel activity 3.9411E-6 2 13 2 6292
passive transmembrane transporter activity 3.9411E-6 2 13 2 6292
substrate-specific channel activity 3.9411E-6 2 13 2 6292
glycerol transmembrane transporter activity 6.3568E-4 2 2 1 6292
alcohol transmembrane transporter activity 1.5888E-3 2 5 1 6292
polyol transmembrane transporter activity 1.5888E-3 2 5 1 6292
substrate-specific transmembrane transporter activity 1.7943E-3 2 267 2 6292
transmembrane transporter activity 2.3578E-3 2 306 2 6292
substrate-specific transporter activity 2.8436E-3 2 336 2 6292
transporter activity 4.1132E-3 2 404 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle