View QC data:

Cutoff value is not valid

X

Choose the searches to display

X

Change the display order of the searches

Search:

Change searches

Crux (search-for-xlinks) search -- Yeast γ-Tubulin Complex (22)

Linker:

dss

Search Program:

Crux

2.1

Upload date:

2016-03-28 00:46:17

FASTA file:

gTuSC-parsimonious-plusRev.fasta

PSM Filters:

X

PSM Filters

fdr b-h (Crux)		value has to be a decimal number
fdr decoy (Crux)		value has to be a decimal number
p-value (Crux)		value has to be a decimal number
p-value bonf. (Crux)		value has to be a decimal number
q-value b-h (Crux)		value has to be a decimal number
q-value decoy (Crux)		value has to be a decimal number
xcorr score (Crux)		value has to be a decimal number

Cutoff value is not valid

Type Filter:

crosslinks looplinks unlinked

Modification Filter:

No modifications 138.0681

Only Include:

URL Shortcut

Use this URL to share this page and all current options with authorized users. This URL does not provide access rights to anyone with the URL.

X

Change Displayed Data

Changing these values and saving will cause a page reload

PSM Data

Click on items to display	Drag the items to the order to display them in. Click the to remove.
fdr b-h (Crux) fdr decoy (Crux) ion current total (Crux) mass error(ppm) (Crux) p-value (Crux) p-value bonf. (Crux) peptide mass average (Crux) peptide mass mono (Crux) q-value b-h (Crux) q-value decoy (Crux) spectrum neutral mass (Crux) spectrum precursor m/z (Crux) xcorr score (Crux)

Summary Statistics

Digestion Statistics

Scan File Statistics

Loading scan file data

No Scan Files

File:

Scan File Statistics

Loading Data

No Data Found

Total Ion Current:
Total MS1 Ion Current:
Total MS2 Ion Current:
Number MS1 Scans:
Number MS2 Scans:
MS2 scans with a PSM meeting cutoffs
Crosslink:
Looplink:
Unlinked:
Combined:

MS1 Binned Ion Current: m/z vs/ Retention Time (click to view full size)

Choose download file format: Text/Tab Delimited

Loading Data

No Data Found

PSM Level Statistics

Interactive QC Plots

Click to launch interactive viewer

Charge State Statistics

M/Z Statistics

Peptide Length Statistics

Chromatography Statistics

PSM Error Estimates

PPM Error

Error Vs Retention Time

Error Vs M/Z

Modification Stats

PSM per Modification

Peptide Level Statistics

X

QC Plot: Retention Time

Scan File:
Scans with:	crosslinks looplinks unlinked
Max:	X: Y:

"Filter PSMs by" is not a number

Max X or Max Y is not empty and is not a number

No Data

Choose download file format: PDF PNG SVG Summary Text Text/Tab Delimited

X

QC Plot: PSM Counts

Scan File:
Choose score:
Include Protein filter:		Exclude Protein filter:
View as:	percentage raw counts
PSMs with:	crosslinks looplinks unlinked all
Max:	X: Y:

No Data

Max X or Max Y is not empty and is not a number

Choose download file format: PDF PNG SVG Summary Text Text/Tab Delimited

X

QC Plot: PSM Score Vs Score

Scan File:
X-Axis Score:
Y-Axis Score:
PSMs with:	crosslinks looplinks unlinked
Max:	X: Y:

No Data

Max X or Max Y is not empty and is not a number

Choose download file format: PDF PNG SVG Summary Text Text/Tab Delimited

Managed by Michael Riffle (mriffle@uw.edu)